Pseudochaenichthys georgianus (South Georgia icefish): 117460315
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Entry
117460315 CDS
T09629
Symbol
cdcp1a
Name
(RefSeq) CUB domain-containing protein 1a
KO
K06732
CUB domain-containing protein 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pgeo04090
]
117460315 (cdcp1a)
CD molecules [BR:
pgeo04090
]
Proteins
117460315 (cdcp1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDCP1_CUB_6
CUB_CDCP1_2
CUB_CDCP1_1
CUB
Sigma_reg_N
Orf78
TMEM154
SIT
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
117460315
NCBI-ProteinID:
XP_033957555
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All DBs
Position
16:23241016..23250200
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AA seq
817 aa
AA seq
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MSSTRFTLRFFLLTFITATVSGVLKLPITPDRGTTLSISSSQVKGCKVCTWAGRLRQCGL
SVVLKDNTPVSVEFDCSRPQDVFSVEIARNIECTTKLCTGHIIQADTGSLPLLDFNRKFI
WNLKASAPKAVKIDFSNTGLRQINPSDRCPDGHSYNLQAFQTSGNVAVGKYCRTGPVVGA
QILNQGSFSLDVPAGQKLQNGQFDVSVGEEIKSLTKITVMIPKGTSSLELLSPNYPDSFP
DDDVMQWYFQVPEKHRTALQFLNVTTPRCLKKETAVEYHSKGRGAMVMSLSDPQPEQNQG
DFTLTLRNCEMDIRSAASPGLLLNLRVSSSRTGLPVSCKVDLSRMGGLSLHIEKLRPASV
CQMRVNSVLKEKITVTSKSELTFQDCLPEDVQVTATKTIECSVLKDCPKTPARLSVPVLP
PCLLAPLSSMTWTLRPPQHGTVELTSPFGPLKQSLPGQQCNNSIIFKLSEDHGTTIGHFC
TPGAIQKVQIHTNMTVTVSGMGGKSLRTLSKPVLMEAFFKEEISERYIFTVSPKRDTPVL
LATPGWPVGMKSYSTVSWIVSVPPRMEAHLMFANLSQPKCSNRHTNIRVQRVGRLEEEYS
RREDEEADSEITVNGNFYLNMSNCMPERGDFSVITKITLHKSKNLLLTTILSVVAVLLVI
FVIVLVVVCVVIRKKKKKLDHEISIYNPNGTSFLPGPNGFPKTREDNESHVYASIEDTLV
YTHLLRKGAEMGVYGEFDTHPPFSGQTDSQKPLVSKIAADDDIPVGIYEKFQAPPLPIRP
PSHVKAMQENVIYQTEDPSEEENSPNLGPRLEPEGGN
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaacaagattcacgcttcggttttttcttctcaccttcatcacagctactgtt
tcaggggtcctaaagctgcccatcacccctgacagaggcaccactctcagcatcagcagt
agtcaggtcaaaggttgcaaagtctgcacctgggcaggacgcctacgacaatgtggttta
tccgttgtgttaaaagacaacactcccgtctctgtggagtttgactgctctcgacctcaa
gatgtgttcagcgtggaaattgcgcgaaatatagaatgtaccacaaagttgtgcactggc
cacatcatccaggctgacaccggctctcttcctttgctggattttaatcgcaagttcatc
tggaacctgaaggcctctgcgccaaaagcagttaaaatagacttcagcaacacgggccta
agacagataaatccctctgacagatgtccagatggacacagctacaatctccaggccttc
cagacttcaggaaatgtggccgtcgggaaatactgcaggacggggcctgttgtcggtgct
cagattctgaatcaaggtagcttttctctggacgtcccagcaggacagaagctgcaaaat
ggccagtttgacgtgtctgttggggaggaaatcaaatccctcaccaaaattacagtgatg
attccaaaagggacctcgtccttagagctgctctcgccaaactaccctgatagttttcct
gatgacgacgtgatgcagtggtactttcaagtaccggaaaaacacagaacggcccttcag
tttttaaatgtcacaacgccgcgttgtctgaagaaggagacagcggtggagtaccacagt
aaagggagaggggcgatggtgatgagtctgtcggacccccagccagaacagaatcaggga
gacttcaccctgacgctgaggaactgtgagatggacataagaagtgctgcttctcctgga
ctgttgctgaacctcagggtgtcgtcttcaagaacaggattaccagtgtcatgtaaagtg
gatctgagcagaatggggggcctttctcttcacatcgagaagttgagaccggcctctgtc
tgccagatgagagtaaactctgtgcttaaggagaaaatcacggtcacgtcgaagagtgag
ctcactttccaggactgccttcccgaagacgtacaggtcaccgccacgaaaaccatagag
tgtagtgtactgaaagactgcccaaagacccctgcccgtctgtcggtgcccgtgctgcct
ccctgcctcctggcccctctgagcagcatgacctggaccctccgtcctcctcagcacggc
actgtggagctcacctctcccttcgggcccctaaagcagtccctacctgggcagcagtgc
aacaacagcatcatctttaaattgtcagaagaccacggcactacaatcggacacttctgc
accccaggagccatacagaaggtccaaatccacaccaacatgaccgtcactgtgtctggg
atggggggtaaatcactgaggactctttcaaagcctgtgctgatggaggcctttttcaaa
gaggagatatcagaaagatacatattcactgtgtctccaaagagagacactcctgtcctt
ttggctactcctggctggcctgtaggaatgaagtcttactccaccgtctcctggatcgtc
tctgttcctccgagaatggaggctcacctgatgttcgccaacctgagccagcccaagtgc
agcaaccgccacaccaacatcagggtgcagagagtcggccgcctggaggaggagtatagc
cgcagggaggacgaagaggcagacagtgagatcacggtcaatggtaacttctacctcaac
atgtcgaactgtatgcctgagagaggagacttcagcgtcatcaccaagatcaccctgcac
aagagcaagaacctgctgctgactaccatcctgagtgtggtcgctgtcctgctggttatt
tttgtcattgtgctggtagtggtctgtgtggtgattaggaagaagaaaaagaagctggat
catgaaatatccatctacaatccaaacggcactagtttcctgccaggaccaaacggcttc
ccaaaaacacgagaagacaacgagtcccatgtgtacgcctccattgaggacaccctggtc
tacacgcacctcctgagaaagggagcagagatgggcgtctacggagagttcgacacacac
ccgcccttctcggggcagacagactcacagaaaccattggtctctaaaatagctgcagac
gatgacataccggttgggatttacgagaagtttcaggctcctccgcttccaatccggccc
ccgagtcacgtgaaagcaatgcaggaaaatgtgatttaccaaactgaggacccaagtgaa
gaggaaaactctccgaatctggggccgcggctggagccagagggaggaaactga
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