Pseudochaenichthys georgianus (South Georgia icefish): 117460335
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Entry
117460335 CDS
T09629
Symbol
prdm13
Name
(RefSeq) PR domain zinc finger protein 13
KO
K24645
PR domain zinc finger protein 13 [EC:2.1.1.-]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117460335 (prdm13)
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
117460335 (prdm13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
PRDM2_PR
zf-C2H2_4
zf-H2C2_2
SET
zf-C2H2_7th_ZNF462
zf-C2H2_15
zf-BED
Zf-C2H2_ZNF451
C2CH-3rd_BIRD-IDD
Motif
Other DBs
NCBI-GeneID:
117460335
NCBI-ProteinID:
XP_033957583
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All DBs
Position
16:complement(16252905..16258304)
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AA seq
637 aa
AA seq
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MVLISPHAMQATRAPTTVSVFADCSIPAGLRIGPVPGIFKLGKYVSDRKEVGPKKKVRLV
RGEFVDESGCLVPDWIGLIRAARNSQEQNLEAVSDLPGGQIFYRVLREIPSGEELSVWYS
NALAQWYDIPTTATPTHDEKGEERYICWYCWRIFKYPNTLKAHVHFHCALSNGRGFLSSE
QARGTETFTRSPKSGDIPNTSTSPRSGHSNSSISDSGRRAVSSSPFLQKVGLSKKSSTEE
QDRALDMSVTSARNQGHILGLGATSSMLSSMGFHPGVRSAFKPTGVSKVPGADASREEAH
AKLSSLGFGKLIGNMKPIRNVGETLNGGGSHPPKCTPAIMDSSSQMVPCTNAIRGFPLLP
HVEETSAFKHVESRMHPGLSPSRYPQMPPGLHFERFSLPHFDGVKTYGGDCNIPLMPLTV
YNGELLYSSPYYPLKFHFSNLLKYPESMSYFGAPSLNHDLGSIANIDREIAMHTQQLSEI
AADKNRTRLDSMPTGTASNAGPGKPKKGHLCLYCGKLYSRKYGLKIHMRTHTGYKPLKCK
VCFRPFGDPSNLNKHIRLHAEGNTPYRCEFCGKVLVRRRDLERHVKSRHPGQTVKKLEDK
PGGLFEDAEQKSDNDSDVDVCFTDDQSDQEESSKNTD
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggttctgatctcaccccacgccatgcaagccacccgggcgcccaccaccgtcagtgta
tttgcggactgcagcatcccggccgggctccggataggaccggtaccgggcatcttcaaa
ctcgggaagtacgtttcagatcgcaaggaagttggacctaagaagaaggttcgcttggtt
cgcggggagttcgtggatgaatcgggctgtctcgtgccagactggatcggactgatccgt
gcagccaggaacagccaagagcagaacctggaggcggtttcagacttacctggcggacag
atcttttaccgcgtgctgagagaaatcccttcaggagaggagctcagtgtgtggtactcc
aacgctctggcccagtggtacgacatcccgaccactgctactccaacgcacgacgaaaaa
ggtgaggagcgttacatctgctggtactgctggcgaatattcaagtaccccaacacactc
aaggcccacgtccacttccactgcgccctgagcaacgggcggggctttttgagcagcgag
caggccagaggcacggagaccttcaccaggtcaccaaagtctggagacatcccgaacact
tccacctccccgaggagcggccacagtaactcctccatctcagactctggcaggcgggct
gtgtcctcatcgccgtttctgcaaaaagttggactgtcgaagaaaagcagcacagaggag
caggacagagccctcgacatgagcgttacctcagccagaaaccaaggacacatccttggc
ctcggggccacatcctcaatgttgagcagcatgggcttccatccgggtgtgcgctctgcc
ttcaaacccaccggagtctccaaagtcccgggcgcggacgcatccagagaggaagcacac
gcgaagctgagcagcctggggttcggcaagctcattggaaacatgaaaccaatccgcaat
gttggcgagactctaaacggaggaggcagccaccctcccaagtgcacacctgcaatcatg
gactcctcatctcaaatggtgccatgcacaaacgccatccggggtttcccgctgctgcct
cacgtagaggagacgtcagcttttaagcacgtagagagccgtatgcaccccggcctgtcc
ccttcccgctacccccagatgccccctggactgcattttgagaggttctctctccctcac
tttgatggggtcaagacatacggtggagactgcaacatccccctaatgcccctcactgtg
tataacggagagcttctgtacagctcgccatactatcctctcaaattccacttcagcaac
ctcctcaagtacccggagtccatgtcctacttcggtgcgccctcattgaaccacgacctg
ggctcaatcgcaaacatcgaccgggagatcgccatgcacacgcaacagctgtctgaaatc
gcggcggataagaaccggacgaggctggactcaatgcccacaggaaccgcgagcaacgcc
gggccaggcaagccgaaaaagggacacctgtgtctgtactgcggcaagctgtactccagg
aaatacggcctgaaaatccacatgaggactcacacaggttacaagccgcttaagtgcaaa
gtgtgcttcaggcccttcggagacccaagcaacctgaacaagcacatccggctgcacgca
gagggaaacacgccgtacaggtgcgaattttgcggcaaggtgctggtgcgcagacgcgac
ttggagaggcacgtgaagtccagacaccccgggcagaccgtgaagaaactggaggacaaa
ccgggaggcctgttcgaggacgcagagcaaaagagcgacaatgacagcgacgtggacgtg
tgcttcaccgacgaccagagcgaccaggaagagtcgagcaaaaacactgactga
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