Pseudochaenichthys georgianus (South Georgia icefish): 117460359
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Entry
117460359 CDS
T09629
Symbol
mex3a
Name
(RefSeq) RNA-binding protein MEX3A
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117460359 (mex3a)
04121 Ubiquitin system [BR:
pgeo04121
]
117460359 (mex3a)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117460359 (mex3a)
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
117460359 (mex3a)
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117460359 (mex3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
zf-RING_2
KH_2
zf-C3HC4
Prok-RING_4
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
117460359
NCBI-ProteinID:
XP_033957623
LinkDB
All DBs
Position
16:complement(33336725..33341516)
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AA seq
523 aa
AA seq
DB search
MPSLLVLAGIMEKNGGYAGDLAGSGFGGEGLLVPPDEEEDDSRALRVALGQLSLLGLGEG
EDGGGAPTTGVQDRSNNNNNHHNHTNNVGGCVDSAILQGKSKLCALYESSSSETKGRGCN
ITECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFLITGRKEDVALARR
EIISAAEHFSMLRASRNKLGVSFSGSPPTPLPGQTTIQVRVPYRVVGLVVGPKGSTIKRI
QQQTCTYIVTPSRDRDPVFEITGSPSNAERAREEIEAHIAFRTGGLHDHNNENDCLGPNG
GSSPSGSSGGLESRLQQVWGLQGGQRKPLTSSYRQNFSEAMVGGVGGGGDGVGIYNKSNF
SSSGEKPCSYFGSESTQSWGDPDYPKQVAFYAQQRSKSFGGLPLPLTRLSPGLSESCGGG
NNNNNSVTSIVPVSGSPHAQARRAHSEPISAGDGFPGRLPVPDSPPATVRECMTCFESKV
TAALVPCGHNLFCMECAIRICELNHPECPVCHTQVSQAIRIFS
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgcctagcctgctggttctagcagggatcatggagaaaaatgggggctatgccggggat
ctggctggctccggcttcggaggcgaaggtctcctggtgccgcccgacgaggaggaagac
gactcccgtgccctcagggtcgcgctgggccagttgtctctgctggggctcggggaaggc
gaggacggcggcggagccccaacaacaggagtacaggaccggagtaacaataacaacaac
caccacaaccacacgaacaacgtcggcggttgcgtggactcggcgatcctccaagggaag
agcaagttgtgcgccctgtacgagagctcctcaagtgagacgaaaggacgaggctgcaac
ataacagaatgcgtcccagtgcccagctctgaacatgtggccgaaatagtggggagacaa
ggttgcaagatcaaagccctgcgggctaagaccaacacctacatcaaaacccccgttaga
ggagaggagccggtgttcctaatcactggccggaaggaggatgttgccctggcccgccgc
gaaatcatctctgccgcagagcacttctccatgctccgggcctcccgcaacaagctggga
gtttccttcagcggctccccgcccactcctctgcccggtcagaccaccattcaggtgaga
gtgccataccgcgtggtggggctggtagtcgggcctaaaggctccaccatcaaacgcatc
cagcagcaaacctgcacgtacatcgttactcccagtcgggaccgcgaccctgtctttgaa
atcacagggtcgcccagcaacgccgagcgggcccgcgaggagattgaagcacacatcgcc
ttccgaacaggaggcctgcatgaccacaataatgagaatgactgtctggggccgaatggt
ggcagcagcccgtcgggcagcagcggtggtctggagagccggctacagcaggtgtggggg
ctgcaggggggccagcgcaagcctctcaccagcagctaccgccagaacttctcagaggcc
atggttggaggggtaggaggaggaggcgacggagtgggaatctacaataagagcaacttc
tccagctccggagaaaagccctgctcttattttggatcagaaagcacccagagctggggc
gaccctgactaccccaaacaggtggccttctatgcccagcagcgctccaagagcttcggg
ggcctcccgctgcccctgaccagactctcccctggcttgtccgagtcttgcggaggtgga
aacaacaacaacaactcagtcaccagcattgtgcctgtgtccggctcacctcatgcccag
gcccgccgcgcccacagcgagcccatctcagccggcgatgggttccccggccgtctgcca
gtgccggactcgcccccggccacagtgcgggaatgcatgacctgctttgaaagcaaagtg
acggctgccttggtgccatgtggccataacctcttctgcatggagtgtgccatccgaatc
tgtgagctcaaccacccggagtgcccagtgtgccacacccaagtatcacaggccatccga
atattctcttaa
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