Pseudochaenichthys georgianus (South Georgia icefish): 117460379
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Entry
117460379 CDS
T09629
Symbol
khdc4
Name
(RefSeq) KH homology domain-containing protein 4 isoform X1
KO
K25780
kelch domain-containing protein 4
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgeo03041
]
117460379 (khdc4)
Spliceosome [BR:
pgeo03041
]
Complex B
Other components
Prp19-related factors
117460379 (khdc4)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
KH_12
Motif
Other DBs
NCBI-GeneID:
117460379
NCBI-ProteinID:
XP_033957647
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All DBs
Position
16:complement(29482968..29490150)
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AA seq
604 aa
AA seq
DB search
MSFGGIQNGGRRSKWDQPGPGSGGMGEAESAPTGALDAAAAVAAKINAMLVAKGKLKPSQ
IGVPGPPDKVVGVWKPPVQTKAKDDLVVAEVEINDVPINCRNLLTRGQTQDEISKVSGAA
VSTRGRYMAAEEKGKALPGDRPLYLHVQGQTRELVDRAVNRIKEIITNGVVKAATASSSS
SSFPPGGASVTVYQQHNLPPPSLPPITHHKPHFQSGMHYVQDKLFVGLEHAILGFVVKER
VEGPGCSYLQHIQAETGAKVFLRGKGSGCLEPASGREAFEPMYIYISHPKPEGLAAAKIL
CENLLQTVHAEYSRFLNQMSSMMPTQQGFAQPQMVNGMPPQPPYYPPAGYQQGYAMPVPP
PQPHPVSLPYTVPPPLHPAGVPPQYSLPPAPLPAPSHSLAPAPALAPPASGTMPQTLPPV
PFPPSAAAPPKAPPAAAPVNPPQKRRFTEEVPDERNSGLLGYQHGPIHMTNLGAGFPVGS
PETAGPPTQSSSGPPSERDSRQLMPPPLLPVNGVRPKMEEKRAPQGPVEPSVKRMKTGLV
AYSGDSSDEEEDHSTSKASGQGNPGAAPPTSSSSWTQGYHCPPPPLPRAKTQPQQQSMPF
WMAP
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttggtggaatccaaaatggcggtcgccgcagcaaatgggaccagcccggcccc
ggctccggtgggatgggggaggcagagtctgctcccaccggggctctggatgctgcagct
gcggtggctgccaagatcaatgctatgttagtagccaaaggaaaactgaaaccctcacag
ataggcgtcccgggaccccctgacaaggttgtgggtgtctggaagcctccagttcaaaca
aaagccaaagatgacctggtcgtcgctgaggtggagatcaacgacgtcccgatcaactgc
cggaatctgctgacgcgtggacaaactcaggatgagatcagtaaagtgagtggtgctgcc
gtatcaaccagaggccgttacatggcggcagaggagaagggcaaagcgttaccaggggat
cgacctctgtatctgcatgtccaaggacagactagggagcttgtcgacagggcagttaac
agaatcaaggagataatcaccaacggtgtggtgaaggctgcaactgcctcatcatcctct
tcatctttcccccctggtggggcttcagtcacagtttaccagcagcacaacctacctcct
ccatcactgccccccataacccaccacaaaccacactttcagtccgggatgcattatgtt
caagataaactctttgtgggcctggagcacgctatcctggggtttgtggtcaaagagcgt
gtggagggccccgggtgttcatacctgcagcacatccaggcggagactggggccaaagtc
ttcctcagaggaaaaggatcaggctgtttagagcctgcttctggacgagaggcctttgaa
cccatgtacatctacatcagtcatcctaaaccagaaggacttgcagcagcaaaaattttg
tgtgagaacctgcttcagacggtccatgcagagtattcccgctttctcaatcaaatgagc
tcaatgatgccaacacaacaaggctttgctcagcctcaaatggtgaatggaatgcctccg
cagcctccgtattacccccccgctggataccagcaaggctacgccatgcctgtaccacca
cctcagccacatcctgtctctctcccttacactgtccctccccctttacatcctgcaggc
gtgcctcctcagtactccctcccccccgcccccctccctgctccctcacactctcttgct
ccggctcctgcccttgcacctcctgcttcaggcacgatgccacagactcttcctcctgta
ccttttcctccatcagctgcagcgccacccaaagctccacctgctgccgctccagtcaac
ccacctcagaagagacgtttcacagaggaggtcccagacgagaggaacagcggcctactc
ggataccagcatggacccattcatatgactaatttaggtgcaggcttcccagtgggcagc
ccggagactgcaggacccccaacacagagttcctctggcccaccgagtgagagggacagt
cggcagctaatgcctccacccctgctgcctgtgaacggagtgagacccaagatggaggag
aaaagagcaccgcaaggccccgtggagccctcggtgaagagaatgaaaactggtttggtg
gcgtacagtggcgactcctctgatgaagaggaggaccactcaacctccaaagcctcaggg
caaggtaaccctggggcagccccccccacctcctcctcaagctggactcagggctaccac
tgccctcctccaccgctcccccgtgctaaaacacagccacagcagcagtccatgcctttc
tggatggccccctaa
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