Pseudochaenichthys georgianus (South Georgia icefish): 117460382
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Entry
117460382 CDS
T09629
Symbol
khsrp
Name
(RefSeq) LOW QUALITY PROTEIN: far upstream element-binding protein 2
KO
K13210
far upstream element-binding protein
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117460382 (khsrp)
03041 Spliceosome [BR:
pgeo03041
]
117460382 (khsrp)
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
117460382 (khsrp)
Spliceosome [BR:
pgeo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117460382 (khsrp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_KhpA-B
KH_Vigilin
KH_PNO1_2nd
KH_NusA_2nd
Motif
Other DBs
NCBI-GeneID:
117460382
NCBI-ProteinID:
XP_033957690
LinkDB
All DBs
Position
1:17535494..17544272
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AA seq
681 aa
AA seq
DB search
MSDYGGLPTNGVGAGMKNDAFADAVQRARQIAAKIGGDGVPSVSNNGGSENYPFTSQKRS
LEEADEPDAKKVASQGEIDSALSIGAQLAALSQQSVRSSTMTEEFRVPDGMVGLIIGRGG
EQINKIQQDSGCKVQIAHDSAGLPDRSVSLTGSPDAIQRAKALIDDIVSRGHEGGGGGGG
SMQEMIIPAGKAGLIIGKGGETIKQLQERAGVKMILIQDGSQPPNIDKPLRIIGDPYKVQ
QAKDMVNEILRERDNAGFGDRSEFGSRMGGGGGGGGGGGGGGGGIGSGGGGIDIAVPRHS
VGVVIGRSGEMIKKIQSDAGVKIQFKPDDGTGSDKIAHIMGPPDQCQHAASIITELLQSI
RAREEGGGQGGPPGEGMPSGGRGRGRAQGNWGPPGGEMTFSIPAHKCGLVIGRGGENVKS
INQQTGAFVEISRQPPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEAPLCPVGGGPGGP
GGPGRPGGPGGPMGHFNPNPYNAGPPGGAPHGAAPGGAQYCPQGWGGNYQQWQAPGQHDP
NKAAADPNAAWAAYYAQYYGQQPGGAMAGQSPGAPAAAAPGDQGQGQQASGGQPDYTKAW
EEYYKKMGMTQPAGGAAAAPGPAAAAAAAAAAAAAGGGAAGGQQDYSAAWAEYYRQQAAY
YGQPGQGPGQGGAPQQGQQAQ
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattacggcggtctgccgactaacggagtcggtgctgggatgaaaaacgacgct
tttgctgatgcagtacaacgagccagacagattgcagctaaaattggtggagacggtgtt
ccttcagtgagcaacaacggaggatctgagaactatccattcacatcacagaaacgatcc
ctggaagaagcagatgaacccgatgccaagaaggtagcatcacagggtgaaattgattct
gcattgtctattggagctcagctggctgccctgtcccaacaaagtgtccggtcctccaca
atgacagaagagttcagagtgcctgatgggatggtggggctcatcatcggccgagggggt
gaacagattaacaaaatacagcaggattctggctgcaaggtccagattgcgcacgacagt
gccggtcttccagatagaagtgtttctctgacggggtctccagatgccatacagagagcc
aaggccctcatagatgacattgtgtcgaggggtcatgagggaggaggaggagggggaggt
tccatgcaggagatgatcatccctgcaggcaaggccggcctcatcatcggtaaaggagga
gagaccatcaaacagcttcaggagcgggctggagttaagatgattcttattcaagacgga
tcccagccacccaacatagataagcccctgcgcatcattggagacccctacaaagtgcag
caagcaaaggacatggtgaatgagattctacgagagagggataatgcaggatttggagac
cggagcgaatttggatcaaggatgggaggaggaggaggaggagggggtggtggtggtggt
ggaggaggtggcatcggcagcggcggtggtggcattgatatagctgtgccccgccactct
gtgggagttgtaattggccgaagtggggagatgatcaagaagatccagagcgatgctgga
gtgaagattcagtttaaaccagatgatggaaccggttctgataaaatagcccatattatg
ggtccaccagaccagtgtcagcatgctgcatcgatcatcaccgaactgctacagagcatc
cgtgcacgagaggagggcggcggccaggggggcccccccggtgaagggatgccatccggt
ggacggggacgaggcagagcccagggcaactggggccctccgggaggagagatgaccttc
tccattcctgcgcacaaatgtgggcttgtcattggcagaggaggagagaatgtgaagtcc
atcaaccaacagaccggtgcgtttgtggagatctctcgtcagccgccaccaaacggtgac
cccaacttcaaactgtttatcatccgagggtccccacaacagattgaccatgccaagcag
cttatagaagagaagattgaggctccattgtgtcctgtgggcggtggtcctggtggtcca
ggtggtcccgggaggccgggaggcccaggtggtcctatgggtcactttaatccaaaccct
tataatgcagggcctccaggtggtgctccacatggagccgcacctggtggagcccagtac
tgtccacagggttggggaggtaactaccagcagtggcaagcccctggtcaacatgacccc
aataaggcagcagcagatcctaatgcagcatgggcagcatactatgcacaatattatggc
caacagccagggggtgccatggcaggccagagcccaggagcccctgctgcagcagcacca
ggggaccagggccagggacagcaggcttctggtggccagccagactatactaaagcctgg
gaggagtactacaagaagatgggcatgacccagccagctggaggggctgcagctgctccg
ggcccggcagcagcagcagcggcggcggcagcagcagcagcagcaggcgggggtgcagct
ggaggccagcaggactacagtgcagcctgggctgagtactacagacagcaggctgcctac
tatggacagccagggcaggggcctggacagggcggtgctccacagcagggacaacaggcc
cagtaa
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integrated database retrieval system
