Pseudochaenichthys georgianus (South Georgia icefish): 117460427
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Entry
117460427 CDS
T09629
Symbol
adamtsl4
Name
(RefSeq) LOW QUALITY PROTEIN: ADAMTS-like protein 4
KO
K23369
ADAMTS-like protein 4
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
117460427 (adamtsl4)
Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
117460427 (adamtsl4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
ADAMTS_spacer1
TSP1_spondin
TSP1_CCN
PLAC
ADAMTS_CR_3
Motif
Other DBs
NCBI-GeneID:
117460427
NCBI-ProteinID:
XP_033957715
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All DBs
Position
16:29250961..29288561
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AA seq
1175 aa
AA seq
DB search
MRLGLLFRLYVLWGFVVVTTSVTKAAKRKVAGRQSRQVFEVEPVEGVWSDWEEWSGCSQT
CGVGASQRSRMCLPPPPQHTPPLSHSPPNWAGYLPGGLGGPVLSPVRPYYPPHYPGQRQP
YHSPSISTNQNPGLSLYRNTNGGGGGAPVLGEANPNPPFYQPEFNPNNQDHVSVYRSPYH
APSQGYNQPARTIRRPTNPGAARAIGSRRSVSANREGLTSRRSSAIRPGQFGYGRVPFSL
PLHRQNRQARHTVNGTDAKTAGLNEDDAENNKKEEEETGSEGEDRQAARRQEALAAAEEL
PTKTTTIGQPHRHVNRPPQTNTEHRRARVPPPHPFSRSSSTSLLPNRHRFDWHSVTAPPP
PIPPLSRPNSPAVTPPFSPPLHRSSSIHRDRELHPGFAPTGDIYPLQHPHIPHMGGESGR
DGGRGAQVYRCSGPEKEYRRCFSQVCGGGALDSRAEQCAAFNTQEFMGRLYNWEPFTEVG
ADKQCELTCRPAGYRFYVRQAERVRDGTPCFNVSTNDICLEGQCLTEGCNGVLGSGSVID
KCGVCGGRESSCRKVTGSFQNVSVPLGYHKLLDIPPGATFINITERRASPNYLAMRSGTG
ASVVNGRWAVDPPGEYQAGGTTFTYNRPRAQAEGEEEKGESLGAPGPTTTQLQLYIIFHK
ENPGIDYEFYIPVEKKEVERERVTERERETPRERPRERDPGRAPLRSPLTVSVEDPPPAP
PPISVPSFPSSSSTSVFSPPISDRWTPERSRPRASAPNRNARIPPRTDLPPDTQPPFVWR
RGELTECSASCGKGSQSRVILCINRHTDDEVPEAKCDSAARPIPEEEPCNPHACPPFWEA
SSWSECSVSCGPGAQQRQLQCRQSFGDRSTMVHPQRCANLTPPDSTQACQLGLCSHWEVR
SDWSTCSVDCGVGRRTRSVLCVSDQGNEVNEKECSTGASPQGSEECNMGPCVTNWYFTDW
SNTCSAQCGPGVQKRESVCLTRGGVREGGGGGDCIGDKPAEMKACNGGPCLAITMWYSSP
WTQCNVPCGNGTQRLDVICVQKMGNDFTVVPASECAHLDKPAAVQQCEMGECEPLWFTTE
WSACSRSCGKGVQMREVRCLTPEKRHSHECDLDNKPEREQICNTIPCSPQVSDENCRDRR
HNCMMVVQARMCVYSYYKTACCASCTQSAQRAKRQ
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgcggctcggtttactattcaggctctatgtgctgtggggctttgtggtggtcacgacc
tccgtgaccaaggctgccaagagaaaggtggctggcagacagtctcgacaggtgtttgag
gtggagcctgtggagggggtgtggtctgactgggaggagtggtctggctgctctcagacc
tgcggggtgggcgcctcccagaggagcaggatgtgtttacctcctccacctcaacacacc
cctcccctctcccactctccacctaactgggcaggatatttgcccgggggcctcgggggt
ccggtcctctcacctgtgcgcccctactaccctcctcattaccccgggcaacgacagcct
tatcactccccgtcgatctccaccaatcaaaacccaggactgtctctgtatcggaatact
aacggaggaggaggaggagctcctgtactgggagaggcaaatccaaaccctcctttttac
cagccggaattcaacccaaacaatcaagaccatgtgtcagtttaccgatcgccgtaccac
gctccatcacagggctacaaccaaccagcacgcaccatcaggagaccgaccaatcccgga
gcagcgagggctatagggagcagaaggtctgtctctgccaatcgggagggtttaacctca
aggagatcgtccgccatccgtccaggtcaatttgggtacggcagggtcccgttctctctt
cctctgcatcgccaaaaccggcaggctcgtcacactgttaacggcaccgatgctaaaaca
gctggactcaatgaagacgatgcagaaaataacaagaaagaggaagaggagactgggagt
gagggagaagatagacaggcggctaggcgtcaggaggcgcttgctgctgctgaggaactt
cccacaaagaccacaacaattggtcaaccccaccgccacgttaacagacccccacaaacc
aacacagagcacaggagggcaagagtcccaccccctcaccccttttctcgctcttcatca
acatctctgcttcccaatcgccaccgctttgactggcactccgtcaccgctcctcctcct
cccatccctcctctctcccgcccaaattcccctgccgtcaccccacctttttccccccct
ctccatcgctccagctccattcacagagacagggagctccacccaggcttcgcacccaca
ggcgacatctacccactgcagcacccccacatcccacacatggggggggaatctggcagg
gatggaggaagaggagctcaggtgtacaggtgctctggaccggagaaggagtaccgcagg
tgcttctcccaggtgtgtggaggaggtgctttggactccagagcagagcagtgtgcagcc
tttaacacccaggagttcatgggtcgcctctacaactgggaacctttcaccgaggttggt
gcggacaaacagtgcgagctgacctgcagacctgctggctatcgtttctatgtccgccag
gccgagcgcgtcagagacgggaccccctgcttcaatgtcagcaccaatgacatttgtcta
gagggtcaatgtctgaccgagggttgcaatggggtgctgggctccggctctgtgattgac
aagtgtggagtgtgtggtgggcgggagagctcctgtcgaaaggtgacgggaagcttccaa
aatgtctcggttccccttggttaccacaagctcctggacatcccgccaggagctacattc
attaacatcacggagagacgcgccagccctaattacctggccatgaggagtggcacgggg
gcttcagtggtgaacgggcgctgggctgtggaccctccaggggagtaccaggcaggaggg
accacgttcacttacaaccgacctagagcacaggcagagggggaggaggagaaaggagag
tccctcggagctccaggacccaccaccacacagctccagctatatatcattttccacaag
gagaacccaggcatcgattatgagttttatattcctgtggagaagaaggaggtggagagg
gaaagggtgacggagagagagagggagacacccagagagaggccgagggagcgagaccca
gggagggcccctcttcgcagtcctctaactgtgtcagtagaagaccctcctcctgctcct
cctcctatttcagtcccatccttcccctcctcctcctccacctctgtgttttctcccccc
atctcggaccgatggacacctgagaggtcccgtccccgagcctctgcccccaataggaat
gctcggatcccccctcgcaccgacctgccaccggacactcagccgccatttgtgtggagg
agaggagaactcacagagtgctctgcttcctgtggcaaagggtctcagagcagagtcatt
ctgtgtataaaccgccacacagacgatgaagtcccggaggccaagtgtgactccgcagcc
aggccgattcctgaggaggagccttgtaaccctcatgcatgcccacccttctgggaggcg
agctcctggtcagagtgcagcgtgtcgtgtggccccggggcgcagcagaggcagctgcag
tgcaggcagagctttggggaccgctccaccatggtccacccgcagcgctgtgccaacctc
accccccccgactccacccaggcctgtcagctcggcctctgctcccactgggaggtcaga
tccgactggagcacgtgctcagtggactgtggggttgggaggaggacgaggagtgtgctc
tgcgtcagcgatcaaggcaacgaggtgaacgaaaaagagtgcagcaccggggccagccca
caaggaagtgaggagtgcaacatgggcccttgtgtaaccaactggtacttcactgactgg
tccaacacttgttcggcgcagtgtggccccggggtgcagaagagggagtcggtgtgtctg
actcgaggaggggtgagagagggaggtggaggaggggactgtattggggacaaaccagca
gagatgaaggcctgcaacgggggtccctgtttggcgataaccatgtggtacagcagcccc
tggacacagtgtaatgtcccctgtggtaatggaactcagcgactggacgtcatttgtgtc
cagaagatggggaatgattttactgtcgtaccagccagtgagtgcgctcatctggacaag
cctgccgcggtgcaacaatgtgagatgggagagtgcgagcctctgtggttcacaacagag
tggagcgcgtgctcacgctcttgtggaaaaggcgtacaaatgagggaagtacggtgtcta
actccagaaaaaaggcacagccatgagtgtgatttggacaacaaacctgaacgggagcaa
atctgcaacacgataccctgcagcccccaagtctctgatgaaaactgccgggacagacgt
cacaactgtatgatggtggttcaggccaggatgtgcgtctactcctattataagaccgcg
tgctgtgcctcgtgtacccagagtgctcagcgtgccaagagacaatga
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