Pseudochaenichthys georgianus (South Georgia icefish): 117460508
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Entry
117460508 CDS
T09629
Symbol
rnf115a
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117460508 (rnf115a)
04121 Ubiquitin system [BR:
pgeo04121
]
117460508 (rnf115a)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117460508 (rnf115a)
Membrane trafficking [BR:
pgeo04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
117460508 (rnf115a)
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117460508 (rnf115a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-rbx1
Zn_ribbon_19
zf-RING_5
zf-Nse
zf-ANAPC11
C1_2
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
117460508
NCBI-ProteinID:
XP_033957853
LinkDB
All DBs
Position
16:complement(29003402..29010023)
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AA seq
315 aa
AA seq
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MAEAAAVPPHRFFCHCCKGEVNPKLPEYICPRCDSGFIEEVTEDSSLLEGGANGIDDAAT
QFAELWHLLLLERPFTIDADTPDSEPRLPGGRLGGLSDLGGLGGGPIGGSVPAGLGGPMG
SLLGAGDHWGPGRPPRLHSQRRYRSRGSSRPDRSPAVEGIVQQFLAGLFANSGVPGSPPL
SWTGMLHSNPGDYAWGQGGLDAVITQLLGQLENTGPPPAEKEKISSLPTVNISQEQADCC
MECPVCKEDFAVGEPVRQLPCNHFFHSDCIVPWLEMHDTCPVCRKSLNGEDSSSQPPSES
PTLSMDPRTQERWSF
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgcggctgttccaccgcatcggtttttctgtcactgttgtaagggagaa
gtgaaccccaaactcccggagtatatctgtccgagatgtgactcagggtttatagaggaa
gtaacagaagactcaagtctcctagagggtggcgctaacgggatagatgacgcagccaca
caatttgcagagctatggcacctgttgttactggagcggccatttacaatagacgctgac
acaccggactcagaaccccggctccctggagggcgtttggggggtctgagtgacctgggg
gggttgggagggggaccaatcggggggtcagtcccagcaggccttgggggacctatgggg
agtctactaggggccggggatcactggggaccgggacgcccgcctcgcctacacagccag
aggagataccgctccagaggcagcagcagaccagaccgctctcctgctgtggaggggatt
gtacaacagtttctcgccggtctctttgccaactctggagtccccggctcacctcccctc
tcttggacggggatgctgcactctaacccaggggattacgcctggggacagggaggctta
gacgctgtgataacacagttactcggtcagttggagaacacgggacctcctccagcagag
aaagagaagatctcttctctcccaacagtcaatatctctcaggaacaagcagactgctgt
atggaatgtccggtgtgcaaagaggacttcgcagtgggagagccagtcagacagctaccc
tgtaaccacttctttcattcagactgtatagtaccgtggctggaaatgcatgacacatgt
ccagtgtgtaggaagagtttgaacggagaagacagcagcagccagcccccatcagagtcc
cccaccctgtccatggacccccgcacacaggagagatggtccttctga
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