Pseudochaenichthys georgianus (South Georgia icefish): 117460530
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Entry
117460530 CDS
T09629
Name
(RefSeq) ankyrin repeat and IBR domain-containing protein 1-like
KO
K11967
ankyrin repeat and IBR domain-containing protein 1 [EC:
2.3.2.31
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117460530
Enzymes [BR:
pgeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
117460530
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
117460530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
Ariadne
Ank_2
IBR_2
Ank
Ank_5
Ank_4
Ank_3
UBA_ARI1
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
117460530
NCBI-ProteinID:
XP_033957891
LinkDB
All DBs
Position
16:complement(19047172..19098997)
Genome browser
AA seq
1097 aa
AA seq
DB search
MGNSATKFRKALINGDEMLACHLYESNPQFKEALDPNSTYGESYQHNTPLHYAARHAMTR
LLRSFLVGKDGNPNKRNVRNETSLHLLCMGPQILTSEGALQPRISRPYEDRHRRAEALQI
ILSWTGAKLDRGEYERADVNATDNKKYTCLHYAAASGMKICVEFLVQREADLFAENEEHE
TPCDCAEKQHHKELALCLESQMVFSLAPEAESIEAEYSALDRRELYEGLRPQDMRRLKDM
LIVETADMLQAPLFTAEALLRAHDWDREKLLEAWMSNAEECCQRSGVQMPHPPPSGYNAW
DTLPSPRTPRNTRSSSTSPDQISLMPADLESSLCGICLSSITVFEEPVDMSCGHEFCRAC
WEGFLNLKIQEGEAHNIFCPAFDCYQLVPVEVIESVVSREMDKRYLQFDIKAFVENNPAI
RWCPKAGCERAVRLSTQGPGTSNSDPLSFPLLRAPAVDCGKGHLFCWECQGEAHEPCDCE
TWKLWQQKVCEMRPVELAGVSDAYEDAANCLWLRSNSKPCANCKSPIQKNEGCNHMQCAK
CKYDFCWICLEEWKKHSSSTGGYYRCTRYEVIQQVEEQSKEMTEEAENKHKSFQELDRFM
HYYTRFKNHELSYQLEQRLLKTAKEKMEQLSRALSGREGGPPDTTFIEDAVLELLKTRRI
LKCSYPCGFFLEPKSTKKEIYELMQTDLEMVTEDLAQKVNRPYLRTPRHRIIRAACLVQQ
KRQEFLASVARGVAPNDSPEAPRRSFTGGTWDWEYLGFASPEEYAEFQYRRRHRQRRRGD
MSSLRSNTPDPDDSSDSILDSQVSGRRHHLMGLGSLDDDDPNILLAIQLSLQDSAMAEIA
YNHDALANEASLGAIGTSLPSRLEQSAAGVELLSRASLSSSELLELEDNLARLGSISSQF
SAQHADSHLRAYRASLPIPVAPGGSTSSTGLFSSSSDTLDSNTYGSHDPSSSSALANANL
LGNIMAWFHDMNPQGITLVPSTSSDTDSNLSALHAGGGGGLLEEEKSGCIPPENRKPQEV
TAEVGFCSQKEEKEGAAAQRPTQLDLVGLETTPPSYMATLDKSSDHTSRGTSRVDTPQCD
SEQMPSSSSSEWEDHLV
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgggaaactctgcgacaaagttccgtaaggctctcatcaatggggatgagatgctggcc
tgccatctgtatgagagcaacccgcagttcaaggaggctctggatccaaactccacatac
ggagagtcctaccagcacaacactccactgcactatgctgcccggcacgccatgacacgc
ctactcaggtcttttcttgtgggcaaagatgggaatcctaacaagcgcaacgtgcgcaat
gagacctctctgcaccttctttgcatggggccccagatcctgacctcagagggggcgctg
cagccccggatctcacggccatacgaagacagacatcgtcgggctgaagctctacaaatc
atcttgtcatggaccggagcaaagctggaccgtggagaatacgagagggctgacgtcaat
gccacggacaacaagaagtacacctgcctgcactacgctgctgcctcaggcatgaagatt
tgtgtggagttcctggtgcagagagaagcggatctgttcgcagagaacgaagagcacgag
actccatgtgactgtgcagagaagcagcaccacaaggagctggccctctgcctggagtcg
cagatggtcttctctctggcccccgaggccgagagtatagaggcagagtactcagccctt
gaccgaagagagctgtacgagggtctgcggcctcaggacatgaggaggctgaaggacatg
ctgatagtggagacagccgacatgctgcaggcccctctcttcactgcagaggctctgcta
cgtgcccacgattgggacagagagaagctcttagaggcctggatgagcaatgctgaggaa
tgctgtcagcggtcaggtgtccagatgccccaccccccccccagtggttacaacgcatgg
gacaccttgccctcgccccggacgccccgcaacacccgctcctcctccacctcccccgac
cagatcagcctcatgcctgcagacctggagtcttctctgtgtggtatctgcttgtcttcc
attaccgtcttcgaggaacctgttgacatgtcctgcggccacgagttctgcagagcatgc
tgggaagggtttctaaatctaaagatccaagagggtgaagcccacaacatcttctgcccg
gccttcgactgctaccagctagtgcctgtggaagtcattgagagtgtggtttccagggag
atggacaagcgctacctccagtttgacatcaaggcgtttgtggagaacaatccggcaatc
cgctggtgtcccaaggcagggtgtgaaagggcggtgaggctgagcacccagggccccggg
acctccaactcagaccctctgagctttcccctcctgagggccccggctgtggattgtggc
aaaggccatctcttctgctgggagtgccaaggtgaggcccatgagccctgtgactgtgag
acatggaagctgtggcagcagaaagtctgcgagatgagacctgtggaattggccggtgtg
agcgatgcctacgaagatgcagccaattgtttgtggttgcgctctaactcaaaaccctgc
gccaactgcaagtccccgatacagaaaaacgaggggtgcaaccacatgcagtgtgccaag
tgtaagtatgacttctgctggatctgtctggaggagtggaaaaagcacagctcctcgacc
ggaggatactaccgctgcacccgctacgaggtcatccagcaggtggaggagcagtccaag
gagatgactgaagaggcggagaataagcacaagagctttcaggaactcgaccgatttatg
cactactacacacgcttcaagaaccacgagctcagctatcagctggagcagcgcctgttg
aaaaccgccaaagagaagatggagcagctcagtcgagccctgagtggaagggaaggcggc
ccccctgacaccacattcattgaagatgcagtcctggaactactgaagacccgccgcatc
ctgaagtgctcttatccttgcgggttctttctggagcccaagagcacaaagaaggagatt
tacgagcttatgcagacggacttggagatggtgacggaggacctggctcagaaggtgaac
cgaccttacctgcggaccccgcgccacaggatcatccgggcagcctgtctggttcagcag
aagcggcaggagttcctggcctcagtggctcggggagtggcccccaatgactctcctgag
gcccccaggcgcagttttaccggcggaacgtgggactgggaatatttaggcttcgcatca
cctgaggagtatgcagagttccagtacagacggagacacaggcagaggaggagaggcgac
atgtcgagtctccggagcaacacacctgaccccgacgactccagtgacagcatcttagac
tcgcaggttagtggacgcagacatcatctgatgggtctcggttctttggacgacgatgac
cctaacatcctcctggccatccagctgtcgctccaggactcagcgatggcagagatcgca
tacaaccatgacgcactcgccaacgaagcctcgctcggcgccatcggcacctctctgccc
tccaggctggagcagagtgctgcaggtgtggagctgctgtccagagcttctctcagcagc
tccgagctgctggagctggaagataacttggcccgactgggctccatcagcagccagttc
tctgcgcagcacgctgacagccacctccgggcctacagggcctcgctgcccatcccagtg
gctccaggtggcagcacctcctccaccggcctcttctcctcctccagcgacacgttggac
tccaacacttacggcagccacgacccatcctcctcctccgcactagccaatgcaaacctg
ctgggcaatattatggcgtggttccacgacatgaatcctcaaggcatcaccctggtcccc
tccacctcctctgacactgactccaacctcagcgcactccatgcaggcggaggagggggt
ctgcttgaggaggagaagagcggatgcatcccgcctgagaacaggaaacctcaggaagtg
acggcagaggtgggtttctgctctcaaaaggaggagaaggagggtgccgcggctcagagg
cccacacagttagatctggtggggctggagaccacgcccccttcttacatggccaccctc
gacaaaagcagtgatcatacatcgcggggaacctcaagggtggacactccacagtgcgac
tctgagcagatgcccagcagcagctcctctgagtgggaggaccacctggtgtga
DBGET
integrated database retrieval system
