Pseudochaenichthys georgianus (South Georgia icefish): 117460536
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Entry
117460536 CDS
T09629
Name
(RefSeq) F-actin-uncapping protein LRRC16A-like isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117460536
Membrane trafficking [BR:
pgeo04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
117460536
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Motif
Other DBs
NCBI-GeneID:
117460536
NCBI-ProteinID:
XP_033957903
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Position
16:22452787..22517657
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AA seq
1422 aa
AA seq
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MSEEVSEVPKELLESVRDAVGRKVKLSLRRRVKLEIKGDKTENRVLALASHRAYLLTARI
PAKVEHCFNYLEIQGIACNKPTQLFIEYERGSFSLKLLSTEEVNEVVAHIGNCLLRICPG
LPPSKVMKKLTMEPPDRLTSLQTLWENNKPAEPGPCGGFSQMYRCVCDWLGLPYKEEVQW
DVDTIYLTQDTRELNLQDFSHLENRDLVAIIAVLEFNQWFTKLSTKDYKLSADVCEQILR
VVTRSSRLEELVLDNAGLKTDFAQKLAAALAHNPSSGLTTINLANNPLEDRGISSLGAQF
AKLRMGLKHLNFSKTSLSPKGVNSLCQSLSVNPSIPSSLVHLDLSGNVLRGDDMQHFYHF
LGQPNSLATLDLSNTDCLLDQVCSALLRGSVQHLSVLNVSKSVFPHRKGKDVPPSFKHFF
SSAVCLNSINVSGTKLPPEALKALLLGLASNLNLKEVTLDLSCCELRSGGSQILEGCIAE
IPNISSLDISDNGLDSDLATLLVSLAKNRSIRHLSLGKNFTNIKSKNLGPVLDSLVHMIQ
EEESPLTSLSLADSRLKSDLTIVLNALGSNSSLTRLDIGGNAMGDMGAKMLAKALQINSK
LRSVIWDRNNTSPQGLQDVAAALEKNFTIRFMPIPIIDASQALKASPEKTEDALLKIESY
LYRNHETRKYLQEQAYRLQQGIVTTTTQQMIDRICVKVQDHLNSLKNSETDVILEDVRTA
ENLIKDARNSKTLLPNLYHLGSAAREEVNSSSAGPIQEKLESMAGEVTSVMDQQLQTLLE
SMVDAAESLCPHVMKRSTLRPELMQASSAKMVVPKSFVTKTLLEQSGVDIINKISEVKLS
LASFLSDRIVDEILEALSTSQLTLADHLVRRGRPLMQQGSVDLDVPEEKIPKRASTEILE
GERLEDLETCMILCCTTMTPKTKRKSIHSRMLRPVSRAFEMEFDLDRALEDVPVLVEESS
KTPTTPSPMFPKLEHRLPGGMVELPSEEEKKLQHFTKLRPRRNKKKHSSKIPQINSAPSQ
DGEQNGLMGRVDEGVDEFFSTKVTRMDSKRSKGSESQDGEKKKKGGFLNLIKRSTKSDKA
DKSDKSDKSDKSDKSDKSEKNQATPAAPGTSSALAPATIPEEPSSPKVALKSPALEPRSR
DASSRSQPADYSSSSDRSEELRTPDSMDEPWECLDGRWSPQGGRRYPALQMMGSGLLAEM
KAKQERRAYKSSSPDRPESNATVAKPQPTNSESRSSSGSNNKPDSPTGSPEKTSPRAENK
PDRAPRLRATSSSSSPGGPFSPKPPVPQGAKPALAARPTIPQKPRTSSTSRSIDDISDLP
SSGPGSPKVSVLPSTLKKTVSEKEKEGQTGLQSAGSANKTTQDVRKGSVSDSLQRPGRLR
VNSEDHGSFKTKDQCPKQDEDKAAGNKSSDSGEEADKDFILI
NT seq
4269 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggaagtgtcagaggtccccaaagagcttctggagagtgtgagggatgcagtg
gggaggaaggtgaagctgtcactgaggaggagagtcaaactggagatcaaaggagacaag
acggagaacagagtcttggcccttgcatcccaccgagcctacctcttgacagcacgcatt
ccagcaaaggtggaacactgctttaattacctggagatccaggggattgcttgtaacaag
cctacacagcttttcatagagtacgagcgtggctccttctctctgaagctgctgtctaca
gaggaggtcaatgaggtggtcgctcacataggaaactgtctgctcaggatatgccctggc
cttccacctagtaaagtcatgaagaagctcaccatggagcctccggacaggctgacctct
ctgcagactctgtgggagaacaacaagccggccgagcccggaccctgtggtgggttttct
cagatgtacagatgtgtgtgtgactggttggggctgccgtacaaagaagaagtacagtgg
gatgtggacaccatctatttgacacaagacaccagggaacttaacctgcaggacttcagc
catctggagaaccgggatctggtcgctataatagcagtcctggagtttaaccagtggttt
actaagctctccaccaaggattacaaactgtctgcagatgtgtgtgagcagattcttcgg
gtagtgactcgttccagtcggctggaagagttggttctggacaatgcaggactcaaaact
gattttgcccagaagctagcagctgccctggcccacaaccccagctcaggactcaccacc
attaatcttgccaacaacccactggaggacagaggtatctcctccctgggtgctcagttt
gccaaacttcgtatggggctcaagcatttaaacttctccaaaacctcactatcacccaaa
ggggtgaacagcctttgccagtcactgagtgtcaacccgtccatccccagcagcctggtc
catctggacctctcaggaaacgtcctccgaggagacgacatgcagcatttctaccacttc
cttggccaacccaacagcctggcaacacttgatctttccaacactgactgcttattggac
caggtttgctcggctctgctgcgaggctcggtccaacacctctctgttcttaatgtttca
aagagcgtctttcctcacaggaaaggcaaagatgttccaccgtcatttaagcatttcttc
agcagcgctgtgtgtctgaactccatcaacgtgtcaggaaccaagctgccgccagaggcc
ctcaaagctctcctacttggcctggccagtaatctgaacctaaaggaagtgactctagac
ctcagctgctgtgagttgcggtcgggaggttctcagatccttgaaggttgtattgcagag
atcccaaacatctctagtctagacatctctgacaatggcctggactcggacttggccact
ctgctggtgtcgctggctaaaaacagatcaatcagacacctgtctctagggaagaacttt
accaacatcaagtccaaaaaccttggtccagtgctggacagcctggtccacatgattcag
gaagaggagtcgcccctcacctctctgtctctagcggactcgaggctgaagagtgatctg
accatcgtcctgaacgccctcggcagcaactcctctctcaccaggttagacatcggcggg
aacgccatgggggacatgggagcgaagatgttggccaaggcgctacagatcaactccaaa
ctcaggtctgtgatctgggacaggaacaacaccagtcctcaggggctccaggatgtagca
gccgctctggagaagaacttcacaattcgtttcatgcccatccccatcatcgatgcctcg
caggctctgaaggccagccctgagaaaacagaggatgccttgctaaagattgagagttat
ctgtacaggaaccatgaaaccagaaagtacctgcaggaacaggcctatcggctgcagcag
ggcatcgtgaccaccaccacacaacagatgattgacagaatctgtgtgaaggtgcaggac
catctgaactctctgaaaaactctgagacagacgtcatattggaggacgttaggacagcc
gagaaccttatcaaagatgccaggaactctaaaacgctgctccctaacctgtaccaccta
ggatcagctgctagagaggaggtgaacagctcctcagccggacccatccaggagaaactg
gagtctatggctggggaggtgaccagtgtcatggaccaacagctgcagactctgttggag
tctatggtggatgcagcagagtctctgtgtccccatgtgatgaagaggagtactcttcgt
ccagagctaatgcaggccagctcagccaagatggtcgtacccaaaagctttgtcaccaaa
accctcctggagcagtctggggtggatatcatcaacaagatcagtgaggtgaagctgagt
ctcgcgtccttcctgtctgatcgcattgttgatgagattttggaagctctttccacttcc
caactcactctggcagaccacctggtgcggcgaggtcgccctttgatgcagcaggggtcc
gttgatcttgacgtcccagaggagaagattcctaaacgggcatcgaccgagattctggag
ggcgagaggctggaggatctggagacctgcatgattttgtgctgcaccactatgactcct
aaaaccaagaggaagagcatccacagcagaatgcttcggccggtgtctcgtgcctttgag
atggagtttgacctggacagagccctggaggacgtccctgtccttgtggaggagagttct
aaaactccaacaactccatctccgatgtttcccaaactggagcaccgactgccaggaggg
atggtggagctgccgtctgaggaggagaaaaagctgcagcacttcaccaaactacgaccc
cgccggaacaagaaaaagcattccagcaaaataccccaaatcaacagcgctccatctcag
gatggggagcagaatggcctcatgggaagggtggacgagggtgtcgacgagttcttctct
acaaaagtcaccaggatggattccaaacgttccaagggttcagaatctcaagatggagag
aagaagaagaaaggtggattcctcaaccttatcaaacgttccactaaatctgacaaagca
gataaatctgacaaatctgacaaatcagacaagtcagataagtcagataagtcagagaaa
aaccaggccacccctgcagccccggggacatcctcagccttggcaccagccactatccct
gaggagccgtcctctccgaaggtggcactgaagagccctgcgcttgagccaaggtccaga
gacgcctccagccgctcgcagcccgcagactacagcagcagctccgaccgctccgaggag
ctgaggacgcccgactctatggacgagccctgggagtgtttagacggcaggtggagtcct
caggggggccggaggtacccggcgctgcagatgatgggcagtggcctcctggcagagatg
aaggccaagcaggagaggagagcctacaagtcttccagccctgacaggccagaaagcaat
gctacagtagccaagccccagccaaccaattcagaaagcaggtcttccagtggctctaat
aataaacctgattccccgactggttctccagagaagacctctccccgtgcagagaacaag
ccagaccgggcccctcgtctcagggctacgtcttcctccagttcccctggggggccattc
agtcccaaacctccggtcccccagggagcaaagcctgctctggctgcccggcccaccatc
ccacagaagcccaggaccagcagcaccagcaggagcatcgatgatatctcagatcttcca
agcagtgggcctgggtctcctaaggtctcagttcttccttctacgctgaagaagacagtg
tcagagaaagagaaagaaggccagaccggtctgcagtcagcaggctctgctaacaaaacc
actcaggatgtgaggaaaggctcggtgtcagactcccttcagcgacctggccgtctccgt
gtcaactctgaggatcacggctccttcaagacgaaggaccaatgtccaaaacaagacgag
gacaaggcagcgggcaataagtcatcagactctggggaggaggcagataaagactttatt
ttaatataa
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