Pseudochaenichthys georgianus (South Georgia icefish): 117460543
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Entry
117460543 CDS
T09629
Name
(RefSeq) B-cell receptor CD22
KO
K06467
CD22 antigen
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117460543
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pgeo04515
]
117460543
04090 CD molecules [BR:
pgeo04090
]
117460543
04091 Lectins [BR:
pgeo04091
]
117460543
Cell adhesion molecules [BR:
pgeo04515
]
Immunoglobulin superfamily
SIGLEC family
117460543
CD molecules [BR:
pgeo04090
]
Proteins
117460543
Lectins [BR:
pgeo04091
]
I-type lectins (Siglecs)
117460543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
Ig_CD22
ig
V-set
Ig_4
C2-set_2
Ig_5
Ig_C17orf99
BatD
C1-set
Ig_7
Motif
Other DBs
NCBI-GeneID:
117460543
NCBI-ProteinID:
XP_033957918
LinkDB
All DBs
Position
16:33997108..34007051
Genome browser
AA seq
1022 aa
AA seq
DB search
MFAKLFEWLVFLAIIKELSCVDTFSLKDTDLTATEGSCIKITCNVNKRVDVVDAHWFWMK
NATWNKDSFTGPVIYSSNNTVRSVSPGFAERVSYIGSPFSRWTNYGTPLEECSIIICNLT
KTDSGNYSFRYIGKDKWMTKPASPITVTENPCPITFETPPAVNGTTLITLTCSTSSSCPS
TLQIHPQWPDSTKQSEKDEKQKRITDTFNVTWLDDGKEFSCQTQDNQDSYLIRNISVTVE
YAPKNTSAEISPKDIVEGQHVTLRCSAKGNPDPTFTWYKNKKAGGVKVAVWDIPSIGESW
DGEYHCEAINNHGTITSNFVRINVTYKPEVEVVSSTSEVKQGDKLTLKCNVKRSNPQPTT
YEWSTNGSTIDGQRTQLYVVERIKPEDKGSYTCRATNTVGTVTSKPLQIIVKYGPRKTTI
SNHGIKEDPYVGVGSSIKFQCNTDANPAPMRYSWYRDNKNKQIDSSQWTSRTTDKNTLFL
NKVQRSDEACYMCNATNLISTGENSEPKCIQVLYAPTSLKLSMDAEVREGQLITINCIVE
SFPPSQLTLTMTPTSTPQPSERHFSEAANDWPPNTLQHKCNVTSAHTGDYICTATNSQGS
TKSEQRTLVVKYSPKDVTIRAEPAFIVTENKSLTLHCNAKSHPPATSFTWMKMTDGKSKI
IWRTHTFSLKSVSYSDSGSYRCTAGNEIGAGDSLQADVKVNYAPKHTKILRAEDGTRSVT
LSCSSHSYPPVIQYLWYKENTGEKDVKVHDRQNYTVYSDQPGVYYCIAKNKINQIQSSEK
IHLFDRSWMKVLFIFFSLITLILSLTIVFVYRKKKKTSIQQGSTNTLPCIGFLGWRMGPR
VRNRINEPSMAEPFRSRDDLLPEQPRRPKAQRCQPSPECAPASNINSVYSFLNLPSEKQS
ESAQGPSAQSPIRQQGGHTQDDSLNYASLHFGNKQQNKQAEEEVYAIVKQDKKNEKRLQD
YENISTAHSAISPNPLNDDTDTSEDELEINYSQVNFKAKTQRAARDLINSEEEETQYSHV
KI
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctaagctattcgagtggttggtatttctggcaataataaaagaattgtcttgt
gtcgataccttctcactcaaagatactgacctgacagccacagaggggtcctgcatcaaa
atcacctgcaacgtcaataaaagggttgatgttgttgacgcacactggttttggatgaaa
aatgcaacttggaataaagattctttcaccggccctgtcatttacagcagtaataacaca
gtgcgttctgtcagtccaggctttgcagaaagagtttcatacatcggctctccattttca
agatggacaaattatggtacacccttagaggagtgtagtattataatctgcaacctgacc
aaaacagacagtggaaactattcttttagatatatagggaaagacaaatggatgactaaa
ccggcatcacccatcacggttactgaaaatccatgcccgattacttttgagacaccgcct
gctgtaaacggaactacattgataacactgacatgctctacttcaagttcatgcccgtca
actctacaaattcatcctcaatggccagactcaactaagcagtcagaaaaggatgaaaaa
cagaaaagaatcacagacactttcaatgtcacctggctggatgatgggaaggaattttca
tgccaaacacaagataaccaagacagctatttgatccgcaatatcagtgtgactgttgaa
tatgctccaaaaaacacatcggctgaaattagtccaaaagatattgtggaaggacaacat
gtgactctaagatgctccgccaaaggaaatcctgaccccacctttacctggtacaaaaat
aaaaaagcaggaggtgtaaaagttgcagtatgggacatcccatcaattggagagtcttgg
gatggagaataccattgtgaagccataaacaaccatggtacaataacatcgaattttgtc
agaattaatgtcacatataagcctgaagttgaggttgtgtcctcaacttctgaagttaaa
caaggagataaactgaccttgaaatgtaatgtgaaaagaagcaacccacaacccacaacc
tatgaatggtcaacaaatgggagcactattgatgggcagaggacacagctgtatgttgtt
gaaagaatcaagcctgaggacaaaggcagctacacatgtagagccactaacactgtgggg
actgtaacatcgaagcctcttcaaattattgttaaatacggcccgaggaagacaaccatc
agtaaccatggtataaaagaggatccatatgtgggagtcggtagctccattaaattccaa
tgcaacactgatgccaatcctgcaccaatgagatactcctggtaccgagacaacaagaat
aaacagattgactcctcacagtggacgtccaggacaactgataaaaacacactgtttttg
aacaaagtgcaaagatcagatgaagcatgttacatgtgcaatgcaaccaacctcatcagc
acaggggagaatagtgaaccgaagtgcatacaagtactgtatgctcccacatctctcaag
ctgtctatggatgctgaggtcagagaaggtcagctcatcaccatcaactgcattgttgaa
agctttccaccgtcacagctcaccttgaccatgactcctacatcaactcctcagccttca
gaaaggcatttctctgaagctgcaaatgattggccccctaacactcttcaacacaaatgt
aatgtaacttcagcccacacaggcgattatatttgcactgccacgaacagtcaaggctca
accaaaagcgaacaaaggacgctggttgtgaaatattctccaaaagatgtgaccataaga
gctgagcctgcctttattgtgactgaaaacaagtcgttgacgctgcattgcaatgccaag
tcccacccaccagcaacctctttcacctggatgaagatgactgatggaaagagtaaaatc
atctggaggactcacaccttcagtctgaagtctgtcagttattcagacagcggatcgtac
agatgtacagccggtaacgaaattggagctggagactcactgcaggctgatgttaaagta
aactatgctccaaaacacacaaagatcctgagagcagaagacgggactcgctctgtgacg
ctgagctgcagcagtcacagctatcccccagttatacaatatttatggtacaaagagaac
acgggagaaaaggacgtcaaagtgcatgaccgtcagaactacactgtgtattcagatcaa
cctggagtctactactgcatcgcgaaaaataaaataaatcagattcagtcctctgaaaag
atccatctgtttgaccgaagctggatgaaggtcctgtttatctttttttcccttataacc
ctgatcctaagtttgacaattgtcttcgtctacagaaaaaagaagaagacatcaattcaa
caaggatctacaaacacactgccctgtattgggtttctgggatggcggatgggccccagg
gtgagaaatcggataaacgagcccagcatggcggagcctttcaggagcagagatgactta
ctgccagaacagccgcgccgtccaaaggcccaacggtgccagccgagtccagaatgcgcg
cctgcatctaacatcaacagtgtttacagttttctgaatctgccctccgaaaaacaatct
gaatctgctcagggtccttctgcacaaagtccaatcagacagcaaggtggacacacacag
gatgattctctcaactacgcgtctttgcactttggaaataagcaacaaaacaaacaggca
gaagaggaagtgtatgctattgtaaagcaagacaaaaagaatgaaaagagactgcaggac
tacgagaacatcagcacagcacactcagccatatctccgaatccattgaacgatgacaca
gacaccagtgaggatgaattagagatcaattattcacaggtgaacttcaaggcaaagact
cagagagccgccagagacttgatcaactctgaagaagaggagacgcagtactctcatgtc
aaaatctga
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