KEGG   Pseudochaenichthys georgianus (South Georgia icefish): 117460556
Entry
117460556         CDS       T09629                                 
Symbol
ctnnb1
Name
(RefSeq) catenin beta-1 isoform X1
  KO
K02105  catenin beta 1
Organism
pgeo  Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04310  Wnt signaling pathway
pgeo04510  Focal adhesion
pgeo04517  IgSF CAM signaling
pgeo04518  Integrin signaling
pgeo04519  Cadherin signaling
pgeo04520  Adherens junction
pgeo04916  Melanogenesis
pgeo05100  Bacterial invasion of epithelial cells
pgeo05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:pgeo00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    117460556 (ctnnb1)
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    117460556 (ctnnb1)
   04518 Integrin signaling
    117460556 (ctnnb1)
   04519 Cadherin signaling
    117460556 (ctnnb1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    117460556 (ctnnb1)
   04520 Adherens junction
    117460556 (ctnnb1)
 09150 Organismal Systems
  09152 Endocrine system
   04916 Melanogenesis
    117460556 (ctnnb1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117460556 (ctnnb1)
   05100 Bacterial invasion of epithelial cells
    117460556 (ctnnb1)
SSDB
Motif
Pfam: Arm ARM_ARMC5 WRM1_C BAR1_C ARM_PUB Cnd1 HEAT_2 TPR_CCP1_N HEAT_EZ Adaptin_N KAP ARMC9_ARM Germane Atx10homo_assoc Queuosine_synth
Other DBs
NCBI-GeneID: 117460556
NCBI-ProteinID: XP_033957950
LinkDB
Position
16:11300317..11319831
AA seq 782 aa
MASQADLMELDMAMEPDRKAAVSHWQQQSYLDSGIHSGATTTAPSLSGKGNPEEDDVDNQ
VMYEWEQGFNQNFAQEQVQDIDGQYAMTRAQRVRAAMFPETLEEGMQIPSSQYDSANPTN
VQRLAEPSQMLKHAVVNLINYQDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKK
EASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALV
KMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCL
QILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAG
GMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAA
GILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQDAEMA
QNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLV
RAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQ
LLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFR
MSEDKPQDYKKRLSVELTSSLFRTEPMAWNETGDLGLDIGAQGEPLGYRQEDPSYRSFHS
GGYGADSMGMEPMMDHDLVGVHHPGQDYPPVEGLPDLGHAQELIEGLPPGDSSQLAWFDT
DL
NT seq 2349 nt   +upstreamnt  +downstreamnt
atggcttcccaggctgatctgatggagctagacatggccatggagccagaccgtaaggcc
gcagtcagtcactggcaacaacagtcttacctggattcaggcatccattcaggggccacc
accactgccccctccctcagtgggaagggcaaccccgaggaagatgatgtggacaaccag
gtcatgtatgagtgggagcagggcttcaaccagaacttcgctcaggaacaagtccaagac
atagatggtcagtacgccatgacgcgtgcccagcgggtgcgtgcagcaatgttccctgag
accctggaggagggcatgcagatcccctcctcacagtacgactcagcgaaccccaccaac
gtgcagaggctggccgagccctcgcaaatgctcaaacacgctgtggtcaatctgatcaac
taccaagacgatgccgagctggcaaccagagccatcccagaactcaccaaactgctcaac
gatgaggaccaggtcgtagtaaacaaagcggcggtgatggtccaccagctctcaaagaag
gaagcttcccgccacgccatcatgcgctcccctcagatggtgtctgccatcgtcaggacc
atgcagaacacaaacgacgtggagacggctcgctgcaccgcagggacactgcacaacctg
tcccatcacagagagggcctgctggcgatcttcaagtctggaggaataccagctctagtt
aaaatgcttggttcaccagtggactctgtcctgttctatgccattaccaccctccacaac
ctcctcctgcaccaggaaggagccaagatggctgtccgtttagctgggggtctgcagaaa
atggtggctctgctcaacaagaccaacgtcaagttcttggcaatcaccactgactgtctc
cagatcctggcctatggaaaccaggaaagcaagttgatcatcttggccagtggtggcccc
caggcattggtcaacatcatgaggacttacacctatgagaagctgttgtggaccacaagc
cgtgttctcaaagttctgtcggtgtgctccagtaacaagccggccatcgtagaagccgga
ggcatgcaggctctgggactccacctgacagaccccagccagagactggtgcagaactgc
ctctggacgctcaggaacttatcagatgctgccaccaaacaggaggggatggagggtctc
ttagggactctggtgcagctgctcggcagtgacgacattaatgtggtgacatgtgctgct
ggcatcctgtctaacctgacctgcaacaactacaagaacaagatgatggtgtgccaggtt
ggaggtatcgaggcgttagtccgcacagtgcttcgggccggagacagagaagacatcaca
gaaccagctatttgtgcgctgcgtcacctcacatcgcgacaccaggacgctgagatggcc
cagaacgctgtcagactgcactacggcctgcccgtggtggtcaagttactgcatccgcca
tcacactggcccctcattaaggccacagtgggtctgatccgtaacctggctctgtgccct
gccaaccacgctcctctgagggagcagggggccatcccccggctggtccagctgctggtc
cgagcccaccaggacacacagagacgcaccagcatgggaggcacgcagcagcagtttgtg
gagggagttcgtatggaagagatagtggagggctgcacaggagcgctccacatcctggcc
agagacgtgcacaacagaatagtcatcagaggactcaacaccattccactctttgttcag
ctgttgtattctcccattgagaacatccagcgcgtggcagcaggcgtcctgtgtgagctg
gcccaggacaaagaggctgccgaggccatcgaggctgagggagccaccgccccgctcaca
gagctattgcacagccgcaacgaaggagtcgccacctacgctgcagcagttctgttccgc
atgtcagaggacaaaccccaggactacaagaaacgcctctcagtagaactcaccagctcg
ctcttcaggacagaacccatggcctggaacgagaccggagacctgggactggacatcgga
gctcagggagagcctctgggctacagacaggaagaccccagctaccgttccttccactct
gggggttacggagcagactcaatgggcatggagcccatgatggaccatgacctggtgggg
gtccaccaccccggccaggactacccccctgtcgaggggctgcctgacctgggacacgcc
caggagctgatcgagggcctgccgcccggcgactccagccaactggcctggttcgatacc
gacctgtaa

DBGET integrated database retrieval system