Pseudochaenichthys georgianus (South Georgia icefish): 117460571
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Entry
117460571 CDS
T09629
Symbol
scn1ba
Name
(RefSeq) sodium channel, voltage-gated, type I, beta a isoform X1
KO
K04845
voltage-gated sodium channel type I beta
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04261
Adrenergic signaling in cardiomyocytes
pgeo04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
117460571 (scn1ba)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
117460571 (scn1ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pgeo04040
]
117460571 (scn1ba)
Ion channels [BR:
pgeo04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
117460571 (scn1ba)
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Ortholog
Paralog
GFIT
Motif
Pfam:
V-set
Ig_3
ig
Motif
Other DBs
NCBI-GeneID:
117460571
NCBI-ProteinID:
XP_033957982
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Position
16:complement(33802981..33819273)
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AA seq
267 aa
AA seq
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MVSVPLISVVFPVSPSSPSPHVAIRNKHTPQEVKVDSSSGSLVESHGEVSAETARCSVRK
KHLELQHVCVVEPAWRWTQTQKPWKKKVSNWAASPVRRGARFPPAPSSTGTSRNQLTTIS
PIYENKEANITDERFFERLVWNGSKHTNDLQDGSIFILNVTFNDTGRYKCIFSRTLMYPA
YEFSTFPNKTIDMTVVPELTRGWASILSEVMMYVSLIGLQVWLVIEMIYCYRKISVAGEE
ALRESAPEYLAIASESKDNCAAVQVAE
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atggtttcagttcctctgatcagcgttgtgtttcctgtttctccttcatctccttccccc
catgttgcaattcgaaacaaacacaccccccaagaggtcaaagttgacagtagttcagga
tcattggttgagagccatggtgaggtctcagcggaaactgcaaggtgcagtgtgagaaag
aaacatttggagttacagcatgtctgtgtcgtggagcctgcgtggaggtggactcaaaca
cagaagccgtggaaaaaaaaggtttcaaactgggctgcatctcctgtaagaagaggggcg
aggttcccgccagcgccttcgtcgactggtacttcaaggaatcagttgaccacaatttca
cccatatatgagaataaagaggccaatatcactgacgaacgtttctttgaacgtcttgtt
tggaatggcagcaaacatacaaatgacctgcaggacggctccatcttcatcctaaacgtg
acgttcaatgacacgggacgctacaagtgcatattcagccgaaccctgatgtatccggcc
tacgagttttccacctttcccaacaagactatcgacatgacagtggtgccagaacttacc
aggggatgggcatccatcttgtctgaggtaatgatgtacgtctccctcatcgggctgcag
gtatggctggtgattgagatgatttactgctacaggaagatttcagtggctggagaggaa
gctcttagagagagcgcgccggagtatttagctatagcgtcggaaagcaaagataactgt
gctgctgtacaagtggcagaatag
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