Pseudochaenichthys georgianus (South Georgia icefish): 117460785
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Entry
117460785 CDS
T09629
Symbol
scap
Name
(RefSeq) LOW QUALITY PROTEIN: sterol regulatory element-binding protein cleavage-activating protein
KO
K26682
sterol regulatory element-binding protein cleavage-activating protein
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117460785 (scap)
Membrane trafficking [BR:
pgeo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
117460785 (scap)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_SCAP
SCAP_N
Sterol-sensing
WD40_Prp19
Patched
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_DCAF12
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
117460785
NCBI-ProteinID:
XP_033958234
LinkDB
All DBs
Position
16:42432402..42496645
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AA seq
1324 aa
AA seq
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MAFESISPGDAFKLGVLASVQKRSLDAPRRSLLDRAVRLDGRQLTPSPRMTLRERLREKI
SAAFYRHGLLCASYPVPIILFTSASILTCCYPLLRLPLPGTGPVEFTTGGRDYSVPSHEP
QGDLGERPDWYRGPPVAYIQQVLVKAAVSPWDSSLVPVDVFRSPLSRAFSLLEEIRNHVH
SDGSGVRSLESLCLQVTDLFPGLRRMQSVLPEHGCLLVSPGNYWQNQQELFDSDPDLLKT
IQKHEPKGLSTSATLRDLLFGVPGKYTGVSHYNRKRVVTYTITIVLSTYDARFLGSLRSR
LKQLHPSANCSLRDDHMVHVHFKEEIGIAELIPLVTTYIILFAYIYFSTRKIDMVKSKWG
LALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIFPYLVVVIGLENVLVLTKSVVSTPVD
LEVKLRIAQGLSNESWSIMKNMATELCIILIGYFTLVPAIQEFCLFAVVGLVSDFFLQMF
FFTTVLSIDIRRMELADLNRRLPAEAGLPPPKPGPLRPREAPPPPRPSPHTITLQTPAFR
NLRLPKRLRVVYFLARTRLAQRIIMVGTVIWIGILVYTDPAGIRTYLAAQVSEQSPLGDP
GGGALPPHLGGAPVFRGVDPTSTLSIHPAPDPTPLPDNHSQGHHDGAGRAGPLPQPPPPA
VPQITWGPEDQEGWRRLSFRHWPSLFSYYNITLAKRYISILPVIPVTVHLSPQEAIETRH
PQDTRHPPPXSIPKVSADLQTDLTLYKVAALGLAAGVLLVLLLFCLYRVLCPRNYGQNGV
SHGRRRRGELPCDDYGYSPPVSEISPLLLRGHSMDIECLASDGMLLASCCLAGQIRVWDA
QTGDCLTVIPHQGLKRSSSGFWDQRDGWDGVGGASEFECLGSDPPLSDGLSEEDGFPLRR
RSAPSRPTLFTDQPDLTPLIDTNFASQPPSHLCTPPPSHLCTPPRDGFDFGGLVERAYTE
HEPPSPSTYPSASSSPPSGVPLQRRLSGGDASASLTPERGSAAGTQATADWESSVWALEL
RGNLIAAGRSSGKLELWDAVEGSLRCVNEDGCSGITALAFLNNRIVAARLNGSLDFFTVE
INKPLGLLQYRGAPGRGTMPPSPCYSSEDVISCQLTRSVQCAHQKPITVLRAAAGRVVTG
SQDHTVRIYRLEDSCCLFTLQGHSGGITAIYIDQTMVLASGGQDGAICLWDVLTGSRVSH
VYGHRGDVTSLVCTNSCVISSGLDDLICIWDRSTGIKLYSIQQEAGCGASLGVISESLLV
TGGQGCVSFWDLNFGDLLQTVYLGQSSDGQGVRQLLVLDNAAIICDFGSELSLVYVPSVL
EKLD
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atggcatttgaatctataagccccggagatgccttcaagttaggcgttttagcaagtgtt
cagaagaggtccctggatgccccgcggcgctccctcctcgaccgcgccgtgcgtctcgat
ggccggcagttgaccccgtcccccaggatgacgctgcgcgagcggctgagagagaagatc
tcggcggctttctaccgccacgggctgctctgcgcctcctacccagttcccatcatcctc
ttcacctccgccagcatcctcacctgctgctatccgttgttgcggctccccctgcctggg
acgggtcccgttgagttcaccacgggggggcgagactacagcgtcccttcccatgagcct
cagggagacctcggagagcggcccgactggtaccggggtcctccggtggcctacatccag
caggtgttggtgaaggcggcggtgtctccgtgggacagcagcctggtgccggtggacgtg
tttcggtctccgctgagtcgagccttcagcctgctggaggagatccgcaaccacgtgcac
tcagacggctctggggttcgtagtctggagtcgctctgtctccaggtgaccgatctgttt
ccagggttacggcggatgcagtcggtgctgccggagcatggttgtttactcgtttccccc
ggcaactactggcagaaccagcaggagctgttcgactcggaccccgacctcctgaagacg
atccagaaacacgaacccaaaggcctcagcacctcggccacactgcgagacctgctgttt
ggcgtccctgggaagtacactggggtcagtcactacaacaggaagagggtggtgacgtac
actatcactatagtgctctccacctacgatgcaaggttcctgggcagcctgcggtcccgt
ctgaaacagctccacccgtcagccaactgcagcctgagagacgaccacatggttcacgtt
catttcaaagaggagattggcatcgcagagctcatcccgctcgtcaccacctacatcatc
ctgttcgcctacatctacttctccacacgtaagatcgacatggtgaagtctaagtggggt
ctggctctggctgccgtggtcaccgtgctcagctctctgctcatgtcggtgggactctgc
acgctgtttggactcacacccacgctcaatggaggagagattttcccgtatctggtggtt
gtgatcggcctggagaacgtcctggttctcaccaaatctgtggtgtccacccctgtcgac
cttgaggtcaaactccgcatcgctcagggcctaagtaatgagagctggtctatcatgaag
aacatggccactgaactgtgcatcatcctcattggatatttcactctggtgccggctatc
caggagttctgtctgtttgctgtggtggggctggtgtccgacttcttcctgcagatgttc
ttcttcaccacggtgttatctatagacatccgacgcatggagctggctgatttgaaccgc
cgcctgccagctgaagccggtctcccgcctcccaaacccggccctctgcgtccccgtgaa
gctccgccccccccacggccctccccccacaccatcaccctgcagacccccgccttcagg
aacctgcggctccccaagaggctgagggtcgtctacttcctggcccgaacccgcctggct
cagcgcatcatcatggtgggcacggtgatctggatcggcatcctggtctacacggacccg
gctgggatcagaacctacctggctgctcaggtgtcggagcagagccctctgggagacccc
ggaggaggcgctctgcccccccacctgggcggggcccctgtgtttcgtggagtcgacccc
accagcaccctcagcatccaccccgctccagatccaacccccttacctgacaaccactca
cagggccaccacgatggggctggcagggcggggcccctcccccagccgccgccccccgcg
gtgcctcagatcacctgggggcccgaggaccaggagggctggaggaggctctccttcaga
cactggccctcgctcttcagctactacaacatcacgctggccaagaggtacatcagcatc
ctgcccgtcattcccgtcacggttcacctcagccctcaggaggccatcgagacgcggcac
cctcaggacacgaggcaccccccccccnnctccattcccaaggtctctgcagacctacag
acggacctcaccctctacaaggttgcggctctgggtctggcggcgggggtcctgctggtt
ctgctgctcttctgtctctaccgggtcctctgcccgcggaactacggccagaacggggtc
tctcacgggcgccggcgccgcggggagctgccctgcgacgactacggatactcgcctccc
gtcagcgagatctccccgctgctgctgaggggccacagcatggacatcgagtgtctggcc
agcgacgggatgcttctggccagctgctgtctggcgggtcagatccgggtctgggacgct
cagactggagactgtctgaccgtcatcccacaccaggggttgaagcgcagcagcagcggc
ttctgggatcagcgggacggctgggacggtgtgggcggagcctcagagtttgagtgtttg
ggctccgacccccccctcagcgacgggctctccgaggaggacggcttccctctgagacgc
cgctccgccccctcccgtcccacgctgttcaccgaccagcccgacctcacgccgctcatc
gacaccaacttcgcctcccagcccccgtcccacctctgcaccccgcccccctcccacctc
tgcaccccgccccgcgacggctttgacttcgggggtctggtggagcgcgcctacaccgag
cacgagcccccctccccctccacgtacccctcggcctcgtcctccccgccctcaggggtc
ccgctgcagaggagactcagcggaggggacgcctccgcctcactgaccccagaaagaggc
tccgccgcggggacgcaggccaccgccgactgggagagctccgtgtgggcgctggagctc
agaggaaacctgatcgctgcagggaggagcagcgggaagctggagttgtgggatgcagtg
gagggctcgctgcgctgcgttaatgaagacgggtgctctggaatcacagcactggccttc
ctcaacaacaggatcgtggcggcgcggctgaacggctctctggacttcttcactgtggag
ataaacaagcctctgggtctgctgcagtacagaggtgctcctggtcgaggcaccatgccc
ccctccccatgttacagcagtgaggatgtgatcagctgtcagctgacgcgctccgtacag
tgcgctcaccagaagccaatcacagtgctgcgagcggcggccggccgggtggtgacgggc
agccaggaccacaccgtcaggatttatcgcctggaggactcgtgctgcctcttcaccctg
cagggtcactctggagggatcacagccatctacatagaccagacgatggtcctggcgagc
ggcgggcaggacggagccatctgcctctgggacgtcctgacggggagtcgggtcagccat
gtttacggtcaccgtggcgacgtcacctcgttggtctgcaccaactcctgcgtcatcagc
tcaggactggacgacctcatctgtatctgggaccgaagcacggggatcaaactgtactcc
atacagcaggaggcgggctgtggggccagcctgggggtcatctccgagtccctgctggtg
acgggggggcagggctgcgtctccttctgggacctgaacttcggggacctgctgcagacg
gtgtatttgggccagagcagcgacgggcagggcgtccggcagctgctggtgctcgacaac
gccgccatcatctgtgacttcggcagcgagctcagcctggtgtacgtgccctcggtgctg
gagaaactcgactga
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