Pseudochaenichthys georgianus (South Georgia icefish): 117460967
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Entry
117460967 CDS
T09629
Symbol
preb
Name
(RefSeq) guanine nucleotide-exchange factor SEC12
KO
K14003
prolactin regulatory element-binding protein
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117460967 (preb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117460967 (preb)
Membrane trafficking [BR:
pgeo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
117460967 (preb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
PEP5_VPS11_N
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
VPS11_N
Beta-prop_CAF1B_HIR1
Ribosomal_L19e
Beta-prop_WDR75_1st
Rhabdo_ncap
Motif
Other DBs
NCBI-GeneID:
117460967
NCBI-ProteinID:
XP_033958518
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All DBs
Position
16:complement(10046185..10054606)
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AA seq
426 aa
AA seq
DB search
MGRRRVPDLYRAPFPLYTIKVDPRTGLVITAGGGGASKTGIKNAMHFLDLQLVGEQQYSA
SLLHAHDTDTRATMNLAVGDGVIAAGQDGSCSLMRFRRSSQREEDKQAGNSEGTARRRGG
KGDRRGQDEAAASGDKSDTKDETSHISVTPLAEVQSDLNPKDPLQKVVRFSPDLSLLLTG
GSDGHIRVWEFPSLKKKYDFKAHGGEIEDLDMSPGNKHLVTVGRDFSCSVWSGSQLAMGL
NWLETTPQIAEKTYRHMACRFGKVEDQKDALRLYTVQIPHKRDRKPPPCYLTKWDGKSFL
PMLTAPCGSEVISSLAVSDSGTFLGLGTVTGSVAIYIAFSLQKLYYVQESHGIVVTDLAF
LPDSLKGKDIRGNNETAMLSVAVDSRCQIHTVPNRRSFPIWLVLFCCGLMVVGVVLLLQY
LFPGFI
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgggtaggaggagggtgccagatctgtacagagccccctttcccttatacaccattaaa
gtggaccccaggacagggctggtgatcacagcaggaggaggcggggcttccaagacgggc
attaagaatgctatgcacttcctggatctgcagctggttggagagcagcagtacagcgcc
agcctgctccacgctcacgacacggacacccgtgccaccatgaacctggcggtgggcgac
ggagtgatcgctgcggggcaggacggcagctgcagcctgatgaggttcagacgcagctcg
cagagagaggaggacaagcaggcggggaacagcgaggggacggcccggcgacgggggggc
aaaggagacaggagaggacaggatgaggcggcggcatctggagacaagtcggacacgaag
gacgagacgtcccacatctctgtgactccgctggccgaggtgcagtcagacctgaacccc
aaggaccccctccagaaggtggtccgcttcagccccgacctgagcctgctgctgacgggg
ggctccgacggacacatacgggtgtgggagtttccatccctgaagaagaagtatgacttc
aaagcacatgggggggagattgaagacttggatatgagtccagggaacaagcacctggtg
accgtgggccgagacttctcctgcagcgtgtggagcggcagtcagctggccatgggtctc
aactggctggagaccacgcctcaaatagcagagaagacttatcgacacatggcatgcagg
tttggaaaggtagaagaccaaaaagacgccctgaggctttacaccgtgcagatcccccac
aaacgggacaggaaaccccccccctgctacctcaccaagtgggacggaaagagcttcctg
cccatgctgacggccccctgcggctctgaggtcatctccagtctggcagtcagtgactcc
ggaacatttctcggccttggaactgtaacagggtcagtggctatctacatcgctttctcc
ctgcagaagctgtattacgtgcaggagtctcacggcattgtggtgacagatctggccttc
ctgcctgactcgctgaaaggcaaagacatcagagggaataatgaaacggccatgctgagt
gtcgccgtggacagccgctgccagatacacaccgtccccaaccgaagatcttttcctatc
tggctggtgctgttctgctgcggcctcatggtggtgggggtcgtcctcctgctgcagtac
ctcttcccaggatttatttaa
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