Pseudochaenichthys georgianus (South Georgia icefish): 117461001
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Entry
117461001 CDS
T09629
Symbol
nr1d2a
Name
(RefSeq) nuclear receptor subfamily 1 group D member 2a
KO
K08531
nuclear receptor subfamily 1 group D member 2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117461001 (nr1d2a)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pgeo03310
]
117461001 (nr1d2a)
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117461001 (nr1d2a)
Nuclear receptors [BR:
pgeo03310
]
1. Thyroid hormone like
1D. Rev-Erb
117461001 (nr1d2a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
zf-RRPl_C4
Motif
Other DBs
NCBI-GeneID:
117461001
NCBI-ProteinID:
XP_033958565
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Position
16:complement(31450007..31457324)
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AA seq
606 aa
AA seq
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MPEDMGTAKPGGVIAYISSGSASSPESCMSPSRSYLTTSQAVSRPSLPSRAVGMVVDISP
PTKNGHQRSHGIEKAGRSSTSTKSNITKINGMVLLCKVCGDVASGFHYGVHACEGCKGFF
RRSIQQNIQYKKCLKMENCTIMRINRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRM
LLEMQNAMNNMMSNNSQLHSMLHGHQSVSPMEAMTSDAGSSTSSSSASDSLSSSNPSSPL
CPQDSESVVSMDTNSSSGSSCASDSGEDESLIALNRQHQEAFAFGQQRAQREGQASPTLS
STALEVGGDGRAEEQQQQQQQQQQENWSCWNNNAVVGGYQQGSYSKVQHVSNTAYSEEKV
YQQQPQQLNSTLKCEPSDDSNTQHGFNTKPASSGYNGPTSCVNNRAYLVCPMNASPYVDP
HKPSQEIWEEFSMSFTPAVRDVVDFAKRISGFCDLPEHDQVGLLKAGTFEVLMVRFASLF
NAVERTVTFLSGKRYSLDTLRALGAGELLNSMCEFSEKLAALRLDSEEMNLFTAVVLVSA
DRSGIQDLNSVEALQDKLIRGLRNLVMQNHGEESATTFTKLLLKLPELRSLNNMHSEELL
SFKVHP
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaggacatggggacagccaagcctggaggagtcatagcctatatttcctctggc
tctgcctccagtccagagtcctgtatgagccccagcagaagctatttgaccacatcccag
gccgtgtcccgcccctccctccccagcagggcagtgggcatggtggtggatatctctccg
cctactaaaaatggccaccaacgtagccatggcattgagaaggctgggcgctcctccaca
tctaccaagagcaacattaccaaaattaacggcatggtgctgttgtgcaaggtgtgtggt
gatgtggcatccggcttccactacggcgtccatgcatgcgagggctgcaagggtttcttc
agaagaagcatccagcaaaacatccagtacaagaagtgtcttaagatggagaactgcacc
atcatgagaatcaaccggaaccgctgccagcagtgccgcttcaagaagtgtctgtctgtc
ggcatgtccagagatgctgtccgatttggccgcatcccaaagagggaaaagcaaaggatg
ctgctggagatgcagaatgccatgaacaacatgatgagcaacaacagccagctgcacagc
atgctgcacggccaccagagcgtgtctcccatggaggccatgaccagcgacgccggctcc
tcgacctcttcctcctctgcttccgattccctgtcaagctcaaacccctcatccccgctc
tgcccccaggactcagagtctgtggtttcaatggacaccaactccagctctggctcctcc
tgcgcgtcagacagcggagaggatgagtccctcattgctttaaacaggcagcaccaagag
gcctttgcattcggccagcagagggcgcagcgagagggccaggcgtcgcccacgttgagc
agcaccgccctggaggtggggggtgacggccgggcggaggagcagcagcagcagcagcag
cagcagcagcaggagaactggagctgctggaacaacaatgcagttgtgggggggtaccag
caaggttcttacagtaaagtccagcacgtcagcaacactgcttacagcgaggagaaggtt
taccagcagcagcctcagcagctcaacagcaccctgaagtgtgagccctcagatgacagc
aacacacaacatgggtttaacacaaaaccggcctcaagtggttacaatggaccaaccagc
tgcgtgaataatagagcatacttggtctgtccaatgaacgcttcaccctacgtggacccc
cacaagccgagccaggagatctgggaggagttctccatgagtttcacccccgccgtgcgg
gatgtggtcgactttgccaagaggatttcgggcttctgcgacctcccggagcacgaccag
gtcggcctgttgaaagctggaacttttgaggtgctgatggtcagatttgcctccctgttc
aacgccgttgagcggacggtgaccttcctgagtggaaagcgttacagccttgacacgctg
cgggcgctgggcgccggagagctgctcaactccatgtgcgagttcagcgagaagctggct
gcgctgaggctggactctgaggaaatgaacctcttcacagccgtggtgctcgtctcagcc
gatcgttcagggatccaggacctgaactcggtcgaggccctgcaggacaaactgatccgg
ggtctgaggaacttggtgatgcagaaccacggcgaagagtcggccaccaccttcaccaag
ctgctgctcaagcttcccgagctgcgttcactcaacaacatgcactcggaggaactgctg
tccttcaaagtgcacccttga
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