Pseudochaenichthys georgianus (South Georgia icefish): 117461039
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Entry
117461039 CDS
T09629
Symbol
atg5
Name
(RefSeq) autophagy protein 5 isoform X3
KO
K08339
autophagy-related protein 5
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04136
Autophagy - other
pgeo04140
Autophagy - animal
pgeo04216
Ferroptosis
pgeo04621
NOD-like receptor signaling pathway
pgeo04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117461039 (atg5)
04136 Autophagy - other
117461039 (atg5)
09143 Cell growth and death
04216 Ferroptosis
117461039 (atg5)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117461039 (atg5)
04622 RIG-I-like receptor signaling pathway
117461039 (atg5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117461039 (atg5)
03029 Mitochondrial biogenesis [BR:
pgeo03029
]
117461039 (atg5)
Membrane trafficking [BR:
pgeo04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
117461039 (atg5)
Mitochondrial biogenesis [BR:
pgeo03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
117461039 (atg5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG5_UblA
ATG5_UblB
ATG5_HBR
DUF6782
Peptidase_M99
Motif
Other DBs
NCBI-GeneID:
117461039
NCBI-ProteinID:
XP_033958607
LinkDB
All DBs
Position
16:complement(44082955..44126437)
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AA seq
275 aa
AA seq
DB search
MADDKDVLRDVWFGRIPTCFLLNQDEVTEREAEPYYLLLPRVSYLTLVTDKVKKHFHKVI
RTDDAEEMWFEYEGTPLKWHYPIGVLFDLHASNTVLPWSITVHFKNFPERDLLHCPSHSV
IEAHFMSSIKEADALKHKSQVVNDMQKKDHKQLWMGLQNDKFDQFWAMNRKLMEYPTEDG
GFRFIPFRIYQTLSDRPFIQKQFRPVSPEGHVHTLGDLLKEVYPVALPNEGGPKRFQVVI
HGIEPLLETPLQWLSEHLSHPDSFLHICVIPVPSD
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgacaaggacgtgttgagagacgtttggttcggccggatccccacctgcttc
ctcctgaaccaggatgaggttaccgagagagaggctgagccctactatctgctgttaccc
agggtgagctacctgactctggtcacagacaaagtgaagaaacacttccacaaagtaata
aggaccgatgacgccgaggagatgtggttcgagtatgaagggacgccgctgaaatggcac
tatccaattggagtcctgtttgacctccatgcatctaacactgtcttaccctggagcatc
actgtgcactttaagaacttcccggagcgtgacctgctgcactgcccgtcccactctgtg
atcgaggcgcacttcatgtccagcatcaaggaggccgacgccctcaagcacaagagccaa
gtggtcaacgacatgcagaagaaagaccacaagcagctgtggatgggcctgcagaacgat
aagttcgatcagttctgggccatgaacagaaagctgatggaatatcccaccgaggacgga
ggcttcagattcatccccttcaggatataccagacgctgagcgacaggccgttcatccag
aaacagtttcgtcccgtttcacccgaaggccacgtgcacactctcggtgacctgctgaag
gaggtgtaccccgtggctttaccgaatgagggcgggccgaagcgcttccaggtggtgatc
cacggcatcgagccgctgctggagacgcctctgcagtggctcagcgaacacctcagccac
cccgacagcttcctgcacatctgcgtcatccccgtgccctcggactga
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