Pseudochaenichthys georgianus (South Georgia icefish): 117461068
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Entry
117461068 CDS
T09629
Symbol
ptprub
Name
(RefSeq) receptor-type tyrosine-protein phosphatase U isoform X1
KO
K16662
receptor-type tyrosine-protein phosphatase U [EC:
3.1.3.48
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pgeo01009
]
117461068 (ptprub)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pgeo04515
]
117461068 (ptprub)
Enzymes [BR:
pgeo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
117461068 (ptprub)
Protein phosphatases and associated proteins [BR:
pgeo01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
117461068 (ptprub)
Cell adhesion molecules [BR:
pgeo04515
]
Immunoglobulin superfamily
Type II RPTP family
117461068 (ptprub)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Fn3_PTPRU
MAM
fn3
PTP-SAK
DSPc
Tc-R-P
ig
Ig_DSCAM-DSCAML_C
Ig_3
Y_phosphatase3
Ig_2
Pur_ac_phosph_N
PTPlike_phytase
I-set
PTP_tm
Motif
Other DBs
NCBI-GeneID:
117461068
NCBI-ProteinID:
XP_033958640
LinkDB
All DBs
Position
16:complement(24188828..24373748)
Genome browser
AA seq
1449 aa
AA seq
DB search
MNTCAFLLILTVQIYADGIEGPTAAGCTFEEDSDPSLCDFTQGEEDDFDWLLFRTYSSPY
ASPDLLRGSYMLVNSSQHAVGHRAQLMLQTLSENDTHCVQFSYFLYSRDGHSPGGMRAYV
RVNGGPLGSSVWNTSGSHAKQWHQVELAVSTFWPNEYQVLIEATVSRERRGYIAIDDIMV
LNYPCYKAPHFSRLGDEEVNAGQNATFQCVASGRAAEAEKFLLERHNGDILTTASVKHLS
HRRFVVSFQLDNVQQTDQDLYRCVTQSPRGSGVSNFAELVVKVPPSPIAPPQLLRAGSTY
LIIQLNTNSILGDGPIIRKEIEYRASQSPWSEVHGVNMVTYKLWHLEPDTEYHISVLLTR
PGEGGTGPPGPPLVSRTKCAEPMRALRGLTAADMQSRQLSLQWENLAFNLTRCHTYSVSL
CYRYTTAGGGGGHNTTVRECLAVEHNASRFMLRDLPPYHSIHVRLSLANPEGKKEGREVT
FQTEEDIPGGIAPESLTFTPLDDMIFLKWEEPVEPNGLITQYEISYQSIESSDPGINVPG
PRRTVSKLKNETYHMFSNLHPGTTYLISVRGRTIKGFGQTALTEITTNISAPTFDYGDMP
SPLSETESTITVLLRPAQGRGAPVSTYQVVVEEEMVKKVKRELGLQECFPLPMSHGEAQA
RGTPHYYTAELPPSSIPEASPFTVGDNHTYNGYWNSPLDPRKSYLVYFQAMSNFRGESRI
NCIRIARKAACKDHRKALEVSQHSEEMGLILGVCAGGLVVLILLLGAVIIIIKKGRDYYS
YYPKPVNMNKTPITYRQEKSHMGSMERSFTDQSTLQEDERMALSFMDAHTCGTRSDVRSS
VNEASSLLGGSPRHQCGRKGSPYHTGQLHPAVRVADLLQHINQMKTSEGYGFKQEYESFF
DGWDCTKKKDKTKGRHDTLSGYDRHRVKLHPLLGDPNSDYINANYIDIRINREGYHRSNH
FIATQGPKQETLYDFWRMVWQENCFSIVMITKLVEVGRVKCSKYWPDDSEMYGDIKITLL
KTETLAEYTVRTFALERRGYSTKHEVRQFHFTSWPEHGVPYHATGLLAFIRRVKASTPPD
AGPVVVHCSVGAGRTGCYIVLDVMLDMAECEGVVDIYNCVKTLCSRRINMIQTEEQYIFI
HDAILEACLCGETAILVNEFAVTYKEMLRVDSQSNSSQLREEFQTLNSVTPHLDVEECSI
ALLPRNREKNRSMDVLPPDRALAFLVTTEGESNNYINAALADSFHRQAAFIVTPHPLPGT
TADFWRLVFDYGCTAVVMLNQLNQSNSAWPCVQYWPEPGLQQYGPMEVEFLSMSADEDVI
TRLFRVKNVTRLQEGQLVVCQFQFLRWSAYRDVPDSKKAFLNLLAQVHKWQRECGEGRTV
VHCLNGGGRSGTLCASNILLEMIQYQNMVDIFYAVKTLRNCKPNMVESLDQYRFCYDLVL
EYLDCFEGR
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atgaacacctgcgcctttctgttgattttgactgttcagatctacgccgatggcatcgag
gggccaacagcggccggctgcacgttcgaagaggactcagaccccagtctgtgcgacttc
acccagggggaggaggacgactttgattggctgctgtttcggacgtacagttcaccttat
gccagccctgacctcctgcgaggatcctacatgctggtgaactcctcccagcatgccgtg
ggtcatcgtgctcagctgatgctgcagacgctgagtgaaaatgacacgcactgcgtccag
ttcagctacttcctgtacagccgcgatggccacagtccagggggcatgcgggcgtatgtc
cgagtgaacgggggtccgctcggcagttcggtgtggaacacgtcggggtctcacgctaag
cagtggcaccaggtggagctggctgtcagcaccttctggccgaatgaataccaggtgctg
attgaggcaaccgtttccagagagcggcgaggctacattgccatagatgacatcatggtg
ctcaactacccctgctataaggcgccgcacttctccaggctaggagatgaggaggtcaat
gctgggcaaaacgctactttccagtgtgttgcttctggaagagcagctgaggctgagaag
ttcctactggagagacacaatggggacattttaacaacagcatcagtcaagcacctgagt
caccggcgctttgtggtgtccttccagctagacaacgtccagcaaacagatcaagacctt
taccgctgcgtcacccagtctcccaggggctctggggtgtcaaactttgctgaacttgtt
gttaaagtacctccatcccccattgcgccaccccagctgctgcgagccggctccacttac
ctaatcatccagctcaacaccaactctatcctgggagatggccccattatcaggaaggag
attgagtaccgcgccagccagtctccatggtcagaggtgcacggagtcaacatggtcacc
tataagctgtggcacctggagccagacacagagtatcacatcagtgtgctgctgactcgg
cccggggagggagggaccggccccccaggaccgcctcttgtgagcaggaccaaatgtgca
gagcctatgcgtgcacttcggggcctcacggccgcagatatgcagtccaggcagttgtcc
ctgcagtgggagaatttggcgttcaacctgacacgctgccacacatactcagtgtccctg
tgctaccgctacaccacggcggggggtggagggggccacaacaccacggtgcgcgagtgc
ctggcagtggaacacaatgcctcgcgcttcatgctgcgtgatctgccaccctaccacagc
atccatgtccgtctgtcactggccaacccagaggggaagaaagaaggcagagaggtcacc
ttccagaccgaggaggacattcccggaggaatcgcgccagagtcgctcaccttcaccccg
ctggatgacatgatcttcctaaagtgggaggagcctgtggagcccaatggccttataaca
caatatgagataagttaccagagcatcgaatcgtctgatcctggcatcaacgtcccggga
cccagaagaactgtgtccaagctgaagaatgagacctaccacatgttctccaacctccac
ccgggaaccacttacctcatttcagttcgaggccgcacaatcaagggctttgggcagacc
gccctcactgaaatcaccaccaacatctcagctcccacgtttgactacggagacatgccg
tcccccctgagtgagacagagagcaccattactgtcctgctgcgcccagcccaaggcaga
ggggcccctgtcagcacataccaggtggttgttgaagaggaaatggtgaagaaagtaaag
agggagctggggcttcaggagtgttttccactgccgatgtcccatggggaggcgcaggcc
cgaggcactcctcactactacacagccgagctgccgcccagcagcatcccagaggccagt
cccttcactgtgggcgacaatcacacctacaacggctactggaacagtcctttggacccc
cgcaagagctaccttgtctacttccaggctatgagcaacttcagaggggaatcaagaata
aactgcatccgcattgctcgcaaagcagcctgcaaggatcaccgcaaagctctggaggtg
tcccagcactcggaggagatgggtctgattctcggggtgtgcgctggaggcctggtggtg
ctcatccttctgctgggtgccgttattatcatcattaagaaaggaagggactactactct
tactatccgaaaccagtgaatatgaataagacacccattacctaccggcaggagaagagc
catatgggctccatggagcgcagtttcacagaccagagcactctgcaggaggatgaaagg
atggccctttccttcatggatgcgcacacctgcggcacccgcagtgacgttcgtagttca
gtgaacgaggccagcagcctgctggggggctccccgaggcaccagtgtggacgtaaaggc
tccccataccacacagggcagctccaccccgccgtcagagtggctgaccttctgcagcac
atcaaccagatgaagacttccgagggctatggctttaaacaggagtatgagagcttcttt
gatggatgggactgcacaaagaagaaggacaaaaccaaaggcaggcatgacacactgtcg
ggatatgaccgccacagagtcaagctccaccctctcctgggagaccccaactcagactat
attaacgctaactacattgatattcggattaacagggaaggctaccatcgatccaaccac
ttcatcgccactcagggacccaagcaggagactctctatgatttttggcggatggtgtgg
caggaaaattgtttcagcatcgtcatgatcactaagctggtggaggttggcagggtgaaa
tgctctaaatactggcctgatgacagtgagatgtatggtgacatcaaaatcacccttctt
aagacggagacactggctgaatacacagttcgcacctttgccttggagaggagaggatac
tcaaccaagcatgaggtgcgtcagttccacttcacatcctggccggagcacggagtgccc
tatcatgccaccggactgttggcctttatacggcgagtgaaagcctctacgcctcctgac
gccggccctgtggtggtccactgcagcgtgggggcgggccgcaccggctgctacatcgtg
ctggacgtcatgttggacatggccgagtgtgaaggcgtggtggatatctacaactgtgtc
aaaaccctctgctccagacgcatcaacatgatccagacagaggagcagtacatcttcatc
catgatgctattttggaagcctgtctgtgcggggagacggccatcttggtaaatgagttt
gcggttacttacaaagagatgctgcgagtcgattcccagagtaattcctctcagctacgg
gaggagtttcagacgctcaactctgtgactccccacctggatgtggaagagtgcagcatc
gctctgttgcccagaaaccgagagaagaatcgcagcatggatgttctgccgcctgatcgc
gctctggccttcttggttacgactgaaggggagagcaacaattacatcaacgctgctctc
gctgacagcttccatcggcaggctgcgttcattgtgacccctcaccctctgccggggacc
acagcggacttttggaggctggtcttcgactacggctgcacggcagtggtcatgctcaac
caactcaaccagtcaaactctgcctggccgtgtgttcagtactggccggagcccgggcta
cagcagtacgggcccatggaggtggagtttctgtccatgtctgctgacgaagatgtcatc
actcgtctgtttcgggtcaagaatgtcacacggctccaagagggccagctagtggtgtgt
cagttccagttcttgcgctggtcggcgtatcgagatgttcccgactccaagaaggctttc
ctcaacctcctggctcaagtgcacaaatggcagagggagtgtggagaaggtcgcactgtt
gtccactgccttaatggtggtggtcgcagtgggaccctctgtgccagcaacattctcctt
gagatgatccagtaccagaacatggtggacatcttctatgcagtcaaaactctacgcaac
tgcaaacccaatatggtggagtccctggaccagtatcgattctgctatgaccttgtcctg
gagtacttggactgctttgaagggagatag
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integrated database retrieval system
