Pseudochaenichthys georgianus (South Georgia icefish): 117461122
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Entry
117461122 CDS
T09629
Symbol
psmc4
Name
(RefSeq) 26S proteasome regulatory subunit 6B isoform X2
KO
K03063
26S proteasome regulatory subunit T3
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
117461122 (psmc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pgeo03051
]
117461122 (psmc4)
Proteasome [BR:
pgeo03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
117461122 (psmc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_5
AAA_2
AAA_16
nSTAND3
RuvB_N
AAA_22
DUF815
NPHP3_N
AAA_28
RNA_helicase
Mg_chelatase
AAA_14
TIP49
NTPase_1
NACHT
ATPase_2
AAA_3
IstB_IS21
AAA_7
TsaE
AAA_33
Parvo_NS1
AAA_18
AAA_17
AAA_25
NB-ARC
AAA_24
ABC_tran
DUF3450
AAA_lid_PRS2_C
Motif
Other DBs
NCBI-GeneID:
117461122
NCBI-ProteinID:
XP_033958729
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All DBs
Position
16:33836383..33844210
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AA seq
417 aa
AA seq
DB search
MEDIVAVEKSPEEMPAILTSRPQTGLSFLAPEPEDLEDLYSRYKKLQQELEFLEVQEEYI
KDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDR
ELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAV
ELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLG
EGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQ
NVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITSNMNLSEEVDLE
DYVARPDKISGADINSICQEAGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggaggacatcgtagccgtagaaaagagcccggaagagatgcctgcaatcctgacctcc
agaccccagacaggcctgtccttcctggcacctgaaccagaggaccttgaggacctttac
agcagatacaagaagctgcagcaggagctggagttcctggaggtgcaggaggaatacatt
aaagatgaacagaagaacctaaagaaagaattcctccatgcccaggaggaggtgaagagg
atacagagcatcccgcttgttattggccagttcctagaagctgtggaccagaacacagcc
atagttggctccactacagggtccaactactatgtgcgcatcctgagcaccatcgacaga
gagctgctgaagcccaacgcctcagtggctctacacaagcacagcaacgccctggtggat
gtgctcccccccgaggctgacagcagcatcatgatgctgacgtcagaccaaaagccagat
gtgatgtatgctgacattggtggtatggacattcagaagcaggaagtccgagaagctgtc
gagctgccactcacacactttgagctctacaaacagattggcattgacccacccaggggt
gtccttatgtacggacctccgggatgtggtaagaccatgttggccaaggctgtggcacat
cacactacagctgctttcatccgcgtggtgggctctgagtttgttcagaagtatttgggt
gaaggccctcgtatggtgcgtgatgtcttccggctggcgaaggaaaatgcaccagccatc
atctttattgatgaaatcgatgccatcgccaccaagcgttttgatgcacagactggagct
gacagggaggtgcagagaatccttctggagctgctgaatcaaatggacggctttgaccag
aacgtcaatgtcaaggtgatcatggccaccaacagagcagacacgctggacccggctctg
ctacgtcctggtcgtctggacagaaagattgagttccccctgcccgaccgcaggcagaaa
cgtcttgttttctccaccatcaccagcaatatgaacctctctgaggaggtcgacctggag
gactatgtggcgagaccagacaagatctccggagccgacatcaactccatctgccaggag
gctggcatgttggcggtccgtgagaacaggtatatcgtcctggccaaagactttgaaaaa
gcttacaaaaccgtcatcaagaaggacgagcaggagcacgagttctacaagtag
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