Pseudochaenichthys georgianus (South Georgia icefish): 117461126
Help
Entry
117461126 CDS
T09629
Symbol
emg1
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117461126 (emg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pgeo03009
]
117461126 (emg1)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
117461126 (emg1)
Ribosome biogenesis [BR:
pgeo03009
]
Eukaryotic type
90S particles
Other 90S particles
117461126 (emg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
117461126
NCBI-ProteinID:
XP_033958736
LinkDB
All DBs
Position
16:complement(41368587..41374337)
Genome browser
AA seq
238 aa
AA seq
DB search
MAAPNEKKRGLEHLDEYEPKPAKHLRSLHDRMADRRLVVILEGASLETVKVGKTFELLNC
DQHKNIIVKSGRNPGHIRPDITHQSLLMLMDSPLNRAGLLQVYIHTEKNALIEINPQTRI
PRTFTRFCGLMVQLLHKLSVRAADGPQRLLRMIKNPVSDHLPPGCPRISTSFSAGEEAIC
PRTLVPEGPAAVVIGAFAHGAVKVDYAEKTVSISNYPLSAALTCAKMCSAFEEVWGVL
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcctaacgagaagaagcgtggtctggaacatttggacgaatatgagccaaaa
ccagccaaacatctccgcagtttgcacgaccgcatggcggacaggaggctggtggtcatc
ctggagggagcgtcgttagagacagtgaaggttggaaaaacctttgagctgctaaactgt
gaccaacacaaaaatatcattgtcaaaagtggaagaaatccaggacatatcaggccagac
atcacacaccagtccctgctcatgttgatggacagtcctctgaacagggcgggtctgctg
caggtttacatccacacagagaagaacgccttgatagagatcaacccacagacccgcatc
cccaggaccttcactcgcttctgtggcctcatggtccagctgctccacaagctgagcgtc
cgggctgctgacggcccccagaggctcctgaggatgattaagaacccggtgtcggaccac
cttcctcccggctgccctcgtatctccacctccttctctgccggagaggaggccatctgt
ccccggactctggtgccagaggggccggctgctgtggtgatcggagcgttcgcacacgga
gcggtgaaagtggactacgcggagaagacggtgtccatcagtaactacccgctctccgca
gcgctgacctgtgctaagatgtgctctgccttcgaggaggtgtggggcgtcctgtga
DBGET
integrated database retrieval system
