Pseudochaenichthys georgianus (South Georgia icefish): 117461128
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Entry
117461128 CDS
T09629
Name
(RefSeq) excitatory amino acid transporter 3-like
KO
K05612
solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter), member 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117461128
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgeo02000
]
117461128
Transporters [BR:
pgeo02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
117461128
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GFIT
Motif
Pfam:
SDF
CCB3_YggT
PdxJ
Motif
Other DBs
NCBI-GeneID:
117461128
NCBI-ProteinID:
XP_033961898
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Position
1:complement(5948618..5959097)
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AA seq
461 aa
AA seq
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METNVPEQGFGNCRGRVKKCRDAVLQNSYLAAVISAVVLGITAGLFLKFYIHISEHDKRY
IGFPGEILMQMVQLMTVPLLLTNLITGASGFKAHRVIAGRATAYFLSTTLMSLSIGIFLM
MMFEPGTSVEGEDPEDIEPFFNIDSLMDIIRNMVPKWPIQASSRQNMREIRRLVKYVDGT
NILGLIVWALIFRVILKRIGKYGKVLVDIFQALNETTKIIVDMILSFLPVGVLFLTTSHG
IEYDNVTTIFQIGKFMALVIIGHIIHSTIVLPLTYFLCTRCNPYDVIKEIVPTLKKALVS
SSSVNTLPLTAQCCESRLMIHKSVTQYMLPIGTNINMDGTAIFITQINHIHLKIGQLIAI
TLTSGVCSIGSSGIPATGGMTTMFVLMAVGLPAKEATILVIAEWLLDRCNSVVNVLGNCI
GVAIVHEVSKGQLGEMDQGPSTPRSSMMRNSAWIRSRLSSA
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggagactaacgttcctgaacaagggttcggaaactgccggggccgagtgaagaaatgc
cgggatgccgtgcttcaaaacagctatctggctgcagttatctcggctgtggtcctgggt
ataactgcgggcttgtttctcaagttctacatccacatctcggagcacgacaagcggtac
atcggcttcccgggagaaatcctcatgcagatggttcagctgatgaccgtgcctctcctt
ctgaccaatctgataacaggtgcttctggttttaaggctcacagagtaatcgctggacgt
gcaacagcatactttctctcaaccactctcatgtctttgtccatcgggatatttctgatg
atgatgttcgaaccagggacttctgttgaaggagaagacccagaagacattgagcccttc
ttcaatattgactccttgatggacatcataaggaacatggtgcctaaatggccgattcag
gctagctccagacagaatatgagagaaatacgacggttggtcaaatatgtcgatggaacc
aacattttgggcctgattgtgtgggctttaatattccgcgtaatcttgaagaggattgga
aaatatgggaaagtccttgtagatatctttcaagccctcaacgagaccacaaaaataatt
gtcgacatgatactgagcttcttgccagttggagtgctgttcttgaccacaagccatggt
attgagtatgataacgtgacaactatctttcaaattggaaagttcatggcactggttatt
attgggcacatcattcactcaacaatagttttgcctctgacctatttcctgtgtacgaga
tgtaacccctatgacgtcatcaaggagattgttcccactttaaagaaggcactggtcagc
tcgtcaagcgtgaacacactaccactcactgctcaatgttgtgagagccgactcatgatc
cacaaaagtgtcactcagtacatgctgcccatcgggaccaacatcaacatggatggaact
gccatcttcattacccagatcaaccacatccacctgaagatcggccagttgatcgctatt
acgttgacatcaggagtgtgcagcataggatcctcagggatcccggctactggaggaatg
accacgatgtttgttctgatggccgttggtttacctgccaaggaagccaccattctggtg
attgcagaatggctcctagaccgctgcaacagtgttgtcaacgtcttgggaaactgtatt
ggcgtggcaatcgttcacgaggtgtcaaaaggacaactgggagaaatggaccaaggaccg
tcaacgccaagatcgtcgatgatgaggaactcagcctggatcaggtccaggctgagttca
gcctag
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