Pseudochaenichthys georgianus (South Georgia icefish): 117461156
Help
Entry
117461156 CDS
T09629
Symbol
nbn
Name
(RefSeq) nibrin isoform X1
KO
K10867
nibrin
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03440
Homologous recombination
pgeo04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117461156 (nbn)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
117461156 (nbn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgeo03032
]
117461156 (nbn)
03400 DNA repair and recombination proteins [BR:
pgeo03400
]
117461156 (nbn)
DNA replication proteins [BR:
pgeo03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
117461156 (nbn)
DNA repair and recombination proteins [BR:
pgeo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
117461156 (nbn)
BRCA1-C complex
117461156 (nbn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nbs1_C
NIBRIN_BRCT_II
FHA
Yop-YscD_cpl
BRCT
RTT107_BRCT_5
PTCB-BRCT
StcE_b-sandwich
Motif
Other DBs
NCBI-GeneID:
117461156
NCBI-ProteinID:
XP_033958806
LinkDB
All DBs
Position
16:complement(28142115..28152177)
Genome browser
AA seq
848 aa
AA seq
DB search
MWILTALEPGGETHYLLSTKEYVVGRKNCDILLPNDQSISRAHAHLTATDQTLTVKDTSK
YGSFVNGQRVTENTTMNLKSGDNVTFGVFHSKFSLDHQKPVVCSSCVDNDGKTSLSQALV
AVGGKLVNTWTQDCTHLAMPTAKVTIKTISALLCCRPIVKPEFFSELSRAVQQKLPPPKS
ESFIPEIDEPSLSKEDVNLGANPIRKRLFNGKTFIFLSAKQLKRLSAAVSFGGGRSQMLE
VGSLPRSLLESPHCCVVDVTSGSSQPLLPTSAAEWANSAKNIVQRKGLRVITESEIGLAA
IYASCEKYCNPSCLTPDSESAPKVQPRIPSASLSQSMAVEETVLPAASQNITAYAVNTER
TQGTEVFKGTEQMSVGETPERKQNQNISQLCGSKAAQNTTQCIVADTMRSSLNTVENTAS
ERKKPESKPRVSGAGSSAVWSQSSLPRTNVGTKTFQQKQSPQKQKIPAQASPQKQSSLTS
FFQTVNKKRPLEDELSAAMSEPKRPLLESPINIQAANTSSTSKETPSRSDRVPSATSQTP
LGSAADLFGGGSGAQSERVSDTVQEEPRNRKRKEMEAEIKMDELEFLRSEDMDFFDEQPS
GNQGQQAQPKVSSSTKQQGVNNVEASSSSKRQRVQLEENGNKQRPEVGLQQESSSIKNQT
TEQHVVSIKTAQIHPVEYTAPRHEFSKPPKASSASTHLKPSDDSELFIEDIEPRKADICQ
PKEETKKPPIKQEVQESNIDEDLPKKLVLVEFRSLTVSAVPTTKPQRVQSYSCAKNFKSF
RKICRAGEVSAVGPVIRGSDLLVHNRGKNTDLDEWLKDAAEEERHNKRDESVGDDLFRYN
PTKLSRRR
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgtggatactgacagccctggagcctggaggtgagacacactatctgctctccactaaa
gagtatgttgtgggacgcaagaactgtgacatcctcctccccaacgaccagtccatcagc
cgggctcatgctcatctcacagccactgaccagaccctgactgtcaaagacacctccaag
tacggttcatttgtgaacggccagcgcgtgacggagaacacaacaatgaacctgaagtca
ggagacaacgttacatttggggtgtttcacagcaaattcagtttggaccatcagaagccc
gtagtgtgttcctcatgtgtggacaatgatggcaagacgtcgctctcccaggccctggtg
gctgtggggggtaagctggtcaacacctggacgcaggactgcacccacctggccatgccc
actgctaaggtcaccatcaagaccatctctgctctgctgtgctgccgtcccatcgtgaag
ccggagttcttctcagagctcagcagagccgttcagcagaaattgccccctcctaaatct
gagagtttcatccctgagatcgatgagcccagcctgagtaaagaggatgtaaaccttgga
gcgaatccaattcggaaacggcttttcaacggaaagaccttcatattcctcagtgccaaa
caactcaagcgcctgagtgcagctgtgagttttggagggggccggagccagatgctggag
gtgggctctctgccccgcagcctgctggagagtcctcactgctgtgtggtggatgtgacc
tcaggcagctcccagcctctgcttcctacttctgctgcagagtgggcaaactctgcaaag
aacattgtccaaagaaaaggcctccgagtcatcacagagtctgaaatcgggttggctgcc
atctatgcttcatgtgagaagtactgcaatccatcctgtctgacaccagactcagagtcg
gcacccaaagtgcaacccagaatcccgagtgcctctctgtctcagagcatggcggtggag
gagactgtgttgcctgctgcctctcagaacatcacagcttatgcagtcaacacagagaga
acacaagggacagaggtatttaaaggaacggagcagatgtcagtaggtgagactcctgag
aggaagcaaaaccagaacatcagtcagctctgtggatccaaagccgctcagaacaccact
cagtgcatcgtggccgacacaatgagatcatcgctcaacactgtagaaaacacggcctca
gagaggaagaagcctgagtccaaacctagagtttcaggtgcaggcagtagtgccgtttgg
tcccagtcttcccttcccaggaccaacgttggcacgaagacattccaacagaagcaatct
cctcaaaaacaaaagatccctgcacaagcttccccacagaaacaatcaagtctgaccagt
ttctttcaaactgtcaacaagaaaaggcctttggaggacgagctctctgctgccatgtca
gagccaaagcgtcctttactggaatcacccatcaacatacaggcagcaaacacctcatcc
acgtctaaagaaacaccctcccgttcagacagagtcccttcagcaacatcccagacgcct
ctggggtcagcagctgatctctttggaggagggtcaggggctcagtcggagagggtctca
gacactgtgcaggaagaaccgcggaacagaaagaggaaggagatggaagcagagataaag
atggacgaactggagtttcttaggtctgaagatatggacttctttgatgagcaaccctca
gggaatcaaggccagcaagcacagccaaaagtgagcagttcaaccaaacaacaaggcgta
aataatgtggaggcttcgtcttcaagcaagaggcaacgggtccaactggaagaaaatgga
aacaagcagaggccagaggtgggcctgcaacaagagtcaagctccattaagaaccaaaca
actgagcagcatgttgtctctataaagacagcgcagattcatcctgttgaatacacggca
cctcgtcatgagttcagcaaacctccaaaagcttcatctgccagtacacacttaaagcct
tctgatgattcggaattattcattgaggatatagagccgcgcaaagcagatatttgccag
ccaaaagaagaaactaagaaacctccaatcaaacaggaggtccaagagtcaaacattgat
gaagatcttcccaaaaagttggttttggtggagtttagatctctgactgtgagcgcagtt
cccacgacgaaaccacagagggtgcagagctacagctgcgcaaagaacttcaaaagtttc
cgcaagatctgccgggcaggggaagtgagcgcagtgggccccgtcatccgaggctctgat
ctgctggttcacaaccggggcaaaaacaccgatctggatgagtggctgaaagatgcagct
gaggaggagcgtcacaacaaacgggacgagagtgttggagatgacctctttaggtacaac
cccaccaaactaagcaggagaagatga
DBGET
integrated database retrieval system
