Pseudochaenichthys georgianus (South Georgia icefish): 117461170
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Entry
117461170 CDS
T09629
Symbol
grik3
Name
(RefSeq) glutamate receptor ionotropic, kainate 3
KO
K05203
glutamate receptor, ionotropic kainate 3
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04080
Neuroactive ligand-receptor interaction
pgeo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117461170 (grik3)
04082 Neuroactive ligand signaling
117461170 (grik3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pgeo04040
]
117461170 (grik3)
Ion channels [BR:
pgeo04040
]
Ligand-gated channels
Glutamate (ionotropic)
117461170 (grik3)
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
117461170
NCBI-ProteinID:
XP_033958833
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All DBs
Position
16:complement(36384412..36489387)
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AA seq
918 aa
AA seq
DB search
MRNTWLSPRSAIWEYWTLLIACLFWIHYSNGMPHVIRIGGIFEQTEGPVSLVSAEELAFK
FAVNSINRNRTLLPNTTLTYDIQRINIYDSFEASRKACDQLSLGVVAIFGPSHSSSSNAV
QSICNALEVPHVQVRWKHHPLDNRDSFYANLYPDYSSLSYAILDLVQSLKWKTATVVYDD
STGLIRLQELIMAPSRYNIRLKIRQLPLDSQDTRPLLKEMKRSREFRIIFDCSHQMAAQV
LKQAQTMGMMTEYYSYIFTTLDLMAIDLEPYRYCGVNMTGFRIMNVDNPLVASIMEKWSM
ERQLPHKADSGLLEGVMTTDAALTYDAVHIVSVSYQHAPQMTVNSLQCHRHKPWRFGGRF
MSFIKESHWDGLTGRLSFNKSSGLRTDFDLDIISLKEEGLEKVGKWSVSGGLNITELPKR
KGMNITDSLANRSLVITTILEEPYVMLKKSDKALVGNDRFEGYCIDLLKELAIVLGFTYE
IRLVPDGRYGSQDEKGQWNGMIRELIEHRADLAVAPFTITYMREKVIDFTKPFMNTGISI
LYRKPNGTNNGFFSFLNPMTPDIWVYILLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSD
VVENNFTLFNSFWFGVGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLT
VERMDSPVDSADDIAKQTKIEYGVVKDGATMTFFKKSKVSTFEKMWAFMSSKPSTSLVKS
IEDGIQRVLKSDYALLMESATIDYITQRNCNLTQVGGLIDSKGYGIGTPQGSPYRDKITM
AILNILEDGRLHMLRQKWWSVSSCLDEERHETGPLGIHNLGGLFIVLACGLVLSIFVAIA
EFLYKLRKTAEHDQRSLCSVMVDEIRLSFTYERRVKHKPQPPVMVKTDAVINMHAYNDRR
LPGTDNMSCSTGMTPVFP
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaatacttggctgtctccccggagtgcgatttgggaatactggacattgctgatt
gcatgtctcttttggattcactactctaacgggatgcctcatgttattcgaataggtggg
attttcgaacagaccgaaggacccgtttcacttgttagtgcggaggagcttgcctttaaa
tttgctgtcaatagcattaacagaaacaggactttgttgccaaacacaacactaacatat
gacatacagaggattaatatctacgacagttttgaggcatcgagaaaagcttgtgaccag
ctttctctaggtgtagtggcaatctttgggccctcacatagttcatcgtcaaacgccgtg
cagtcaatctgcaatgcgttggaagtgccgcacgtccaggtgcgatggaaacatcacccc
ctggacaacagggacagcttttatgccaatttatacccggattattcttcactaagctat
gctatcctggacctggtgcagtctctcaaatggaaaacagccaccgtcgtatatgatgac
agcacagggcttatcagactacaggagctgataatggccccgtccaggtacaacattagg
ctaaagatccgtcagcttcctctcgactcacaggacacgagaccccttcttaaggaaatg
aagcggagccgggagtttcgcatcatcttcgactgcagtcaccaaatggctgctcaagtc
ctcaagcaggcgcagaccatggggatgatgacggagtattactcctacatcttcaccact
ctggacctgatggccattgacctggagccatatcgatactgtggtgtcaacatgaccggc
ttccgcatcatgaacgtggacaatcccctggtcgcatccattatggagaaatggtcgatg
gaaaggcagcttccacataaagctgactcaggcctgctggagggggtcatgacgacagat
gcggctctgacctatgatgcagtccacattgtatccgtctcgtaccagcacgcgccacag
atgacggtaaactcgctgcagtgccaccgccacaaaccctggagatttggagggcgcttc
atgagtttcatcaaagagtcacactgggatggtttgacggggagactgtcgttcaacaag
tcatcgggtctgcgtacagacttcgacctggacatcatcagtctgaaggaggaaggactt
gaaaaggtggggaagtggagtgtgtcgggaggtcttaacatcacagaactgccgaagcga
aaagggatgaacatcaccgattccctggctaaccgatccctcgtcatcaccaccatcctg
gaggagccatacgtcatgcttaagaagtctgacaaggcgctggttgggaacgacagattc
gaaggatactgcatcgacttgctcaaggagctggccatcgtcctgggcttcacgtatgag
atccgtctggttcctgacgggagatatggctctcaggatgaaaagggccaatggaatggc
atgataagggaactgatagagcatagggcagacttggcagtggctcccttcaccatcacc
tatatgcgtgaaaaggtcatcgacttcaccaagcccttcatgaacactggaatcagcatc
ctgtatcgcaaacccaatggtaccaacaacggcttcttctccttcctgaaccccatgact
cctgacatctgggtctacatcctcctggcctacctgggtgttagctgtgtcctctttgtc
attgccaggtttagcccgtatgaatggtacgacgcccatccctgcaacccaggatcagat
gtggtggagaacaacttcaccctcttcaacagcttctggtttggagtcggctccttaatg
caacaaggctcagaactgatgcccaaagccctgtccaccaggatcatcggggggatctgg
tggttcttcacactcatcatcatatcctcgtacactgctaatctagcagcctttctcact
gtggagagaatggactcgcctgtggactcagccgatgacatcgctaagcagaccaagatt
gagtatggtgtggtgaaggatggagcaaccatgactttcttcaagaaatccaaggtttct
acatttgagaagatgtgggcctttatgagcagcaagccgagcacttcccttgtaaagtct
attgaagatgggattcagagagtgctgaagtcagactatgccctccttatggagtctgca
actattgattacattactcagaggaactgtaacctgacccaggtgggagggctcatcgac
agcaaaggctacggcatcggcactccccaaggctccccgtacagggacaaaatcaccatg
gcaatcctaaatatcttggaggacgggcgcctacacatgctgaggcagaagtggtggagt
gtgagcagctgcttagacgaagagcgtcacgagacaggccccttgggtattcataacctg
ggtgggctattcatcgtgctggcatgtggactagtgctctccatttttgtggcgattgct
gaattcctctacaagctaaggaagactgcagaacatgaccagaggtctttgtgcagtgtc
atggtggacgagatcagactgtcgttcacctacgagaggcgggtgaaacacaagcctcag
cctccagtcatggtgaagacggatgcagtgatcaacatgcatgcctacaacgaccgacga
ctcccgggaacggacaatatgagctgcagcactgggatgacccccgtgttcccgtga
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