Pseudochaenichthys georgianus (South Georgia icefish): 117461185
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Entry
117461185 CDS
T09629
Symbol
efna3b
Name
(RefSeq) ephrin-A3b
KO
K05462
ephrin-A
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117461185 (efna3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pgeo04052
]
117461185 (efna3b)
00536 Glycosaminoglycan binding proteins [BR:
pgeo00536
]
117461185 (efna3b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pgeo00537
]
117461185 (efna3b)
Cytokines and neuropeptides [BR:
pgeo04052
]
Cytokines
Growth factors (RTK binding)
117461185 (efna3b)
Glycosaminoglycan binding proteins [BR:
pgeo00536
]
Heparan sulfate / Heparin
Axon guidance molecules
117461185 (efna3b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pgeo00537
]
Others
117461185 (efna3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ephrin
Motif
Other DBs
NCBI-GeneID:
117461185
NCBI-ProteinID:
XP_033958851
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All DBs
Position
16:28518416..28607569
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AA seq
221 aa
AA seq
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MALIVLSLWVLTSLTWADVIPVPANRHSVYWNSSNIHLRREGYTMQVNVNDYLDIYCPHY
NDSHRMVGTGEQYILYMVSYRGYRNCDPQLGFKRWECNRPHAPHAPIKFSEKFQRYSAFS
LGYEFHVGQEYYYISTPTHHHGRSCLRLRVYVCCSTASDVDDEPEPTEPDYTLRPGLKLE
DSDEYNPFIPKLEKSVSGSSPSRDRLLLTVTMLLLAALFIS
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggctctgatagtgctgtctctctgggtgctaacgagtctcacctgggcggacgtgatc
ccggtgccagccaacaggcactccgtttactggaacagctccaacatacatctgcgtagg
gagggctacacgatgcaggtgaacgtcaacgactacctggacatctactgccctcattac
aacgacagccatcgcatggtgggcaccggcgagcagtacatcctctacatggtcagttac
cgcggttacaggaactgcgacccccagctgggcttcaagaggtgggagtgcaaccggccc
cacgccccccacgcaccaatcaagttctccgagaagttccagcgctacagtgccttctcg
ctgggatacgagttccacgttggacaggagtactactacatctccacgcccacccaccat
cacggccgcagctgtctgagactacgagtgtacgtctgctgctccacggcctctgacgtg
gatgatgagccagagcctacagaaccagactacacgcttagaccaggcctaaaactggaa
gatagtgatgaatataaccctttcattcccaaactggagaagagtgtcagcggaagcagc
ccgtccagggatcgccttctcctcaccgtgacgatgctccttctggccgctctcttcatc
tcctag
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