Pseudochaenichthys georgianus (South Georgia icefish): 117461252
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Entry
117461252 CDS
T09629
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2D isoform X1
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04020
Calcium signaling pathway
pgeo04080
Neuroactive ligand-receptor interaction
pgeo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
117461252
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117461252
04082 Neuroactive ligand signaling
117461252
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pgeo04040
]
117461252
Ion channels [BR:
pgeo04040
]
Ligand-gated channels
Glutamate (ionotropic)
117461252
SSDB
Ortholog
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GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
117461252
NCBI-ProteinID:
XP_033958952
LinkDB
All DBs
Position
16:30004460..30056715
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AA seq
1953 aa
AA seq
DB search
MVAIPTLSLLLVLAEWAGLVDASPHLLLRPSPRERDSGAMMNFNIAVIHAGSTVQAEAAV
AGPGGRVLYPGFGRVYGSLGESVVTQWGSANVIWLQVNDSSPKTVLSQLCELLAARPLQG
LVYEEERPPRTAWGPLAPMLEFVSAQTGLPIVAVGGGAGLGRMPQESGSVFLQFSSSTAL
QLEVIFEVLEEYDWTSFSVVATRHHGYQEFLSIVEGLTDGSFIGWEKKSVVILNVTDDPG
GARTRRLLKENEAQVRLLYCSQEEAELVFKAAWAAGQAGASHMWFAVGPALSGLSMESLP
RAVFAVRPQGWRDEPRRRIARGVSVLTHGAVAMRKDYGTTGGPNFVTNCMTDANQTQRLR
GRMRYFGNITLGGRDYSFNVDGYLANPFLDVISWTPGRGWEDVGWWENGVLRLRYPAWSR
YGPFLKPPDDAQHLRVVTLEERPFVIVELADAASGTCIRDSVPCRRPLNASVIHEGVAPM
KQCCKGFCIDILKRLAKIVGFTYDLYLVTNGKHGKKIDGVWNGMIGEVVYKRADMAIGSL
TINEERSEVVDFSVPFVETGISVMVSRSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVT
VFIFEFFSPVGYNRSLANGKKAGGSTFTIGKSVWLLWAIVFNNSVPVENPRGTTSKIMVL
IWAFFAVIFLASYTANLAAFMIQEEYIDTVSGLSDKKFQHPEEQYPPLKFGTVPNGSTEK
NIRSNYPDMHQYMGKYNQRGVEDAITNLKTGKLDAFIYDAAVLNYMARKDEGCKVMTIGS
GKVFATTGYGIALHKNSRWKRPLDLALLQLVGDDEIEMLERLWLSGICHNDKIEVMSSKL
DIDNMAGVFYMLLVAMGLSLLVFAWEHLVYWKLRHCMATSSGKLDFLLAISRGMYSCCSF
EDETTPGGSKTLPTHHHTAMVTVPSKPHVVSTSKTNPVIAMAQQQQPPQQQQPQPVYKTP
LPGSPPTVVHSGTALGPSNAPIAGAPLPCSTFLPRSDRRLAVVDRWRLPKTAAATNPLAV
RGAITDMGPFAQKVPPNWASAAGGGGGLDGYKRYYGPIDPEGLGPCMEQQAGSQTPKTMP
RGHPQPPPASVAFYSEKGVDHGVGKKVVGGGSGGQGKGAVKPLGTPRLPSKSQAPLPPTP
PLPHPSPPLPSSFWRKRRPKKPKEPGGPLYENILPLGRRGGARDGVREGGGRRARPLSPP
LSLPVPVPLSPSYTPPSPSASLHYTSSSSSSTTSSTSTSSSASSSRSTSPTYSYSSSRST
RDRTGGIDGEDDDDDEELTEESSLLLGRGRERERSIIRPRSFSQGRLPPPIPPRKPRTSW
GDRERERERERGGSQLSQLQEWWASWSERERGGAGGDAERLKREKKRRKDKEKEKKKKKK
NKKRKKREEREKERERERKRRKVKKKKKKELKTKKRKKSIGGRRSEPEEGDGEAEREGEA
EGEMEGGLQDYSFSAQYRSTFGEKGRDSWEGDRVERGRREGGDEGNEQEDSSRGRERRPK
SSHSHSRPRIPSKRYPNLNKLPASVKFWVNGRGDDSNTPPTSLHPLLPSSKRRKSGGVER
DDSGRLGERRPLLMHYEKEKAQTREGPSFPEWDSEDEDEDDDDEEEEERERQRERGRRVG
RGAVSESERDRARAEDSYSDEGSSGEFGRFERYWEGGAGGGSAGIGGIGGGGWFFGTYPS
REKGGSINSRDDLLLGTRAEGWIGADFLGSGPGVGWGSGGGSGGLGSQWPPPPAAFPPPR
RYWSMDKIPVKGEKKWKSRGGKSKGRSRDRGGEAGRATMCSCSLYPQPHPYPHPHSRSHA
SHSKRGPTALSHSQEELLPHCHSFSGGSRPKPLPPKPDSSQAKSGSQSNLSLSTQPMDHP
PQPSPSPPQQQSMSPTSLPVPIPPPPSSSSVPPPAGVGMVGQAQASASAKLQYQRLRSVP
QPRRFYSPHLPLKAKSLCSRRGSAHFSSLESEV
NT seq
5862 nt
NT seq
+upstream
nt +downstream
nt
atggtcgccatacctactctctctctcctattggtcctggcagagtgggcaggtctggtg
gacgcctccccccacctcctgctccggcctagcccccgggagcgggattctggcgccatg
atgaacttcaacatcgccgtgatccacgccggctctacagtgcaggcggaggcggccgtg
gcggggcctgggggaagggtcctctaccctggcttcggccgggtgtacggctccctgggg
gagagcgtggtcacccagtggggctctgctaacgtcatctggctacaggtgaatgacagt
agtcctaagacggtgctgtcccagctgtgtgagctgctggcggcgcggcccctgcagggt
ctggtgtatgaagaggagaggccgcctcgcacggcctggggtcctttggccccaatgctg
gagtttgtgtctgcgcaaacaggactgcccatagtagctgtaggagggggagcggggctg
gggaggatgccacaggaatcaggttccgtctttctccagttcagctcctctactgccctc
cagttagaggtcatctttgaggtgctggaggagtacgactggacgtccttttccgtggtg
gccacacgtcaccacggctaccaggagttcctgtctattgtggagggcctgaccgacggc
tcgttcatcggctgggagaagaagagtgtggtgatcctgaacgtgacagacgaccctggg
ggggcacgcacgcgcaggctgctgaaggagaacgaggcgcaggtgcgcttgctgtactgc
tctcaggaggaggcagagctggtcttcaaagccgcctgggccgccggtcaggccggggcc
tcgcacatgtggttcgccgtggggccggctctctcaggtttgagcatggagagcctgcca
cgggctgtgtttgccgtgcggccccagggctggagggacgaaccccgccggaggatcgct
cgaggagtctctgtgctgactcacggagctgtggccatgcgcaaggattacggaacaacg
ggtgggccaaactttgtcaccaactgcatgacggacgccaatcagacccagagactgcga
ggcaggatgaggtatttcggcaacataacgcttggtggtcgtgactattccttcaatgtg
gacggttacctggccaacccattcctcgatgtcatttcctggacacctggacgtggatgg
gaagatgtaggctggtgggagaacggcgtgctgaggctccggtacccggcatggtcccgc
tacgggccattccttaaaccacctgacgatgcccagcacctgcgcgttgtcacactggag
gaacggccatttgtcattgtggagctggcagatgctgcatccgggacctgcatccgtgac
tcggtgccctgcagacgaccccttaacgccagtgtcatccatgagggcgtggctcccatg
aagcagtgctgcaaaggcttctgcattgacatcctcaagagattggccaagattgtcggc
ttcacctatgacctttacttagtgaccaatgggaaacatgggaagaaaattgatggggtt
tggaacggaatgattggagaggtggtgtacaagcgagccgacatggccattggctcgctg
actatcaatgaggagaggtcggaggtcgtggatttttccgttccctttgtggagacgggg
atcagtgtcatggtctcccgtagcaacggaactgtatcaccatccgctttcttagagccc
tacagtcccgcggtgtgggtgatgatgttcgtcatgtgcctgaccgtagtagctgtgacc
gtcttcatatttgagttcttcagccctgtgggctacaatcgcagtctcgcgaacggcaag
aaggctggaggctctactttcactatagggaagtcggtatggcttttgtgggctattgtc
ttcaacaactctgtgccggtggagaaccccagaggaaccaccagcaagatcatggtgctg
atctgggccttcttcgctgtcatctttctggcctcctacactgctaacctggctgccttc
atgatccaggaggagtacattgacacagtgtcagggctctcggacaaaaagtttcagcat
cccgaggagcagtacccacctctgaagtttggcacggtgcccaatgggagcacggaaaaa
aacatccgctccaactacccagacatgcaccagtacatgggcaaatacaaccagagagga
gtggaggacgccataacgaacctaaagactgggaaactagatgcttttatttatgatgct
gcagtattgaactatatggccaggaaggacgaaggttgtaaggtgatgaccataggctcg
gggaaggtttttgccaccacaggctacggtatcgccctgcacaaaaactcacgctggaaa
cgtcctcttgacctggccctgctgcagctggtgggagatgatgagattgaaatgctggag
cgcctttggctgtctgggatctgccataatgacaaaattgaggtgatgagcagtaaactg
gatattgacaacatggctggtgttttctacatgctgctggtggccatgggcctcagtctg
ctggtgtttgcctgggaacacctggtctactggaagctgcgccactgcatggccaccagt
tctggcaaattggactttctcctggcaatcagcagaggcatgtatagctgctgtagtttt
gaagatgaaacaacgccaggtggaagtaaaactttgccaactcatcaccacactgcgatg
gttacagttccgtccaagccgcatgttgtctcaacgtctaagaccaacccagtcattgcc
atggcgcaacagcagcaaccaccgcaacagcagcaaccacagcccgtctacaagacacct
ctaccgggctctcctcccaccgtggtgcattctgggactgcactgggtccctcaaatgcc
cccatagctggtgcacccctcccttgttccaccttcctgccccggtcagaccgcagactg
gccgtggtggatcgctggaggctgccaaaaaccgctgcagccacaaacccattggctgta
aggggggcaatcactgacatgggaccctttgcccagaaagtcccaccaaactgggcttca
gctgctggagggggtgggggacttgatggctataagagatactatggtcccattgaccct
gagggactggggccctgcatggagcagcaggcaggttcccagacccccaagactatgccc
aggggccacccccagccccctccagccagtgtggccttctattcagagaagggcgtagat
catggggtggggaagaaggtggtgggaggtggcagcggaggtcaggggaagggggccgtt
aaacctctgggcactcccagattgccttctaagagtcaggcccctctgccccctacaccc
ccgctgccacacccctctccccctctcccctcatccttctggaggaagcgcaggcccaag
aaacccaaagagcctggagggcctctgtatgagaacattttgccactggggcggagggga
ggagcacgagatggagtgagagagggaggagggaggagggcacgccccctctctcccccg
ctctcacttcctgtgccagtacccctcagcccctcttacacccctccttcgccctctgca
tctttgcactatacgtcctcctcgtcttcgtcgaccacctcgtccacatccacgtcctca
tctgcttcatcttcccgctcgacctctcccacctactcttacagctcctccaggagcaca
cgggacaggactggaggaatagatggagaggatgacgatgacgatgaagagctgaccgaa
gagtcgagcctcctccttggcagggggagggagagggaacgctcaatcatccggcctcgt
tccttcagccaagggcgtctgccaccgcccattccccccagaaaaccccgcacatcctgg
ggtgacagagaacgggaacgagagagggagagggggggaagccaactgtctcagctccaa
gagtggtgggcaagctggagtgagagagaaaggggtggagcaggtggagatgctgaaagg
ctaaaaagggaaaagaagaggaggaaagacaaggagaaagagaagaagaagaagaaaaag
aacaaaaagaggaaaaagagggaagagagggaaaaggagcgagagagagaaaggaagcgg
cgaaaggttaaaaagaagaagaagaaggagctaaagacaaagaaaaggaagaaatcaatt
ggggggagacgctccgagccagaggagggagatggagaggcagagagggaaggggaggca
gaaggagagatggaagggggactacaagactactcgttctctgctcagtatcggagcaca
tttggggagaagggacgggattcttgggaaggagacagagtagagagagggaggagggag
ggaggagatgagggcaatgaacaggaggacagtagcaggggcagggagaggcgtcccaaa
tcctcacactctcattccagacctcgtattcccagtaagcgctacccgaacctaaacaaa
ctgcctgcatccgtaaagttttgggtgaatggaagaggagatgattctaacactcctcca
acctccctccacccactgctgccctcctccaagaggagaaaaagtggaggggtagagaga
gatgacagcgggaggttaggagagcggcgtcctttgttaatgcattatgaaaaagagaaa
gcacagactagagaagggccgtccttccctgagtgggactctgaggatgaggatgaggat
gatgatgatgaggaagaggaggagagggagagacagagggagagggggaggagagtaggt
aggggggcagtgtctgagtcagagagggacagggcccgggcagaggacagttattcagat
gagggctcgtcaggggagtttggccgttttgaaagatactgggaaggaggtgcaggggga
ggcagcgctggaatagggggcataggcgggggaggctggttctttggcacttacccctcc
agagagaaaggggggagtataaatagtcgggatgatttgttactaggaactcgggcagaa
gggtggattggtgctgatttcttgggttcagggccaggagtaggttggggctcaggggga
gggagtggaggactcggctcccagtggccacccccccctgcagccttccctccaccgagg
aggtactggtccatggacaagatccctgtgaagggagagaaaaagtggaagagtagagga
gggaagagcaaggggcgatctcgagacagagggggagaagcaggacgagccaccatgtgt
tcctgcagcctttacccacagccccatccttacccccatccccacagccgctcgcacgcc
tcccactccaagagaggacccacggcgctttcacacagccaggaagagcttctcccccac
tgccacagcttcagcgggggttctcgccccaagcctctccccccaaaaccagattccagt
caggccaaatcaggcagccaatctaacctcagcctcagcacacagcccatggaccatccc
cctcagccctcaccctcgcccccccagcagcaatccatgtctcccacttctctcccggtg
cccatcccgcctcccccctcttcatcctccgtcccacccccagcaggggtcgggatggtg
ggccaggctcaggcttcggccagtgccaagctccagtatcagagacttcgctcggtgcca
cagccacggaggttctactccccacacctgccactcaaagccaagagcctttgctctcgc
cgagggtcggcccacttctccagcctggagagcgaggtatga
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