Pseudochaenichthys georgianus (South Georgia icefish): 117461267
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Entry
117461267 CDS
T09629
Name
(RefSeq) B-cell receptor CD22
KO
K06467
CD22 antigen
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117461267
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pgeo04515
]
117461267
04090 CD molecules [BR:
pgeo04090
]
117461267
04091 Lectins [BR:
pgeo04091
]
117461267
Cell adhesion molecules [BR:
pgeo04515
]
Immunoglobulin superfamily
SIGLEC family
117461267
CD molecules [BR:
pgeo04090
]
Proteins
117461267
Lectins [BR:
pgeo04091
]
I-type lectins (Siglecs)
117461267
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_2
Ig_3
ig
I-set
V-set
Ig_CD22
Ig_5
Izumo-Ig
Ig_4
Motif
Other DBs
NCBI-GeneID:
117461267
NCBI-ProteinID:
XP_033958972
LinkDB
All DBs
Position
16:11874546..11885494
Genome browser
AA seq
643 aa
AA seq
DB search
MLAGALVLGTILTALPGIQSRWSVSFSRREICVWAGTTVTLPCRYDYPSGHNVKRVMWFR
VSAEGRREFTYHTDPNEISLSYRGRTRYIGGSYSSCSVQIRVVKLSDAGQYHFRFETDQP
LGRWTSPNTITLHVTDLQVQVHPARPRNMFGLAETVFVGCQATGCAAPGRSLALYRNGLN
QGSYEKWMTINRFDQQHVGAYTCRPIPPQNVQSPPLTLALGYNPRYTSIAVFPVGGLSEG
ESVTLTCSSDAAPPVQSFAWFKDMESGSIPDSFRPQLRLSQVRYTDRGEYFCVARNSLGT
DRSNPLLLNVTYSPKNTRVLVSPAADIREGSFLNLSCVCQAHPPASRYAWYRILGDQLLS
KGSFQNLTFPSVRAHLAGQYYCTAWNHLGHQTSPVATLSILYPPKNTSVLARPSGVVDAG
RPLTLTCSSQANPAVDNFTWHRLALDGGPVQSWGSRPGPVFSFSEVGPRESGQYYCEARN
RIGAHSSPVLTVRVRGRLKVIALASAVGVSAGLITLTVAIMISKNMHRVDMESGEVANKR
PSVTADTMFFESAQQTFPVRKGKMSDIPEESEDLSDSHPAIVPLKDAPPITEVKSPALNY
ITVHYSKLSSVDQVQIHNLPLGGERKPKDSPSVVYTLLQQPLR
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgttggctggtgcgttagttctgggcaccatcctcacagctttgccaggtatccagagc
aggtggagcgtgtcattttcccgccgggagatctgtgtgtgggcgggaacaactgtcact
ctgccctgtcgctatgactacccatcaggtcacaacgtgaagcgggtcatgtggttccgt
gtgtctgcagagggtcggagggagttcacttaccacactgacccgaacgagatcagcctg
tcgtaccgcggacgcacgcggtacatcgggggcagctactccagctgctcagtgcagatt
cgggtggtgaagctgagtgatgcaggccagtaccacttcaggtttgagacagaccaacca
ctggggagatggacctccccgaacaccatcaccctccatgtgacagacctgcaggtccag
gtgcatccagccaggcccaggaacatgtttggccttgcagagactgtgtttgtaggctgc
caggcgacaggatgtgctgctccaggaaggagcctggcactgtacaggaacggactgaac
cagggctcctatgagaaatggatgaccatcaaccgctttgaccagcagcatgttggagcg
tacacctgtcgaccaatcccgccacagaacgtgcagtccccgcccctcacgctggctctt
ggatacaatccccgctacacctccatagcagtcttcccagtagggggtctgtcggagggg
gagtctgtcactctcacctgcagcagtgacgcagctccacctgtgcagagctttgcatgg
ttcaaagacatggagagtggcagcatcccggacagttttcggcctcagctccgcctgtcc
caggtccgatacaccgatagaggagagtacttctgtgtagcacgcaactccctggggaca
gaccgctccaaccctcttctactcaacgtcacttactctccaaagaacacgcgtgtgctg
gtgagtcctgcagcagatatcagagagggctcctttttgaacctgagctgcgtctgccaa
gcccaccctcctgccagcaggtatgcctggtatcgtatcctaggtgaccagctgctgtct
aaaggaagtttccagaacctgacgttcccctcagtgcgtgctcacctcgctggtcagtac
tactgcacggcgtggaaccacttaggacaccagacgtcccccgtcgctacgctctctata
ctctaccctcctaagaacacttcagttctggctcgtccctccggtgtggtggacgccggc
cgacctttgaccctgacctgcagcagccaggccaacccagcagtggacaacttcacgtgg
caccgcttagctctggacgggggccctgtacaatcctggggcagcaggcccggtcccgtc
ttctccttctcagaggtcggccccagagagagcggtcagtactactgcgaggccaggaat
cggatcggagcccacagctctcctgtcctcactgtgcgggtcagaggtcgtcttaaggtc
atcgccctggcgtcagcagtaggggtgtctgctggactcatcactctcactgtggccatt
atgatcagtaagaacatgcacagggtggacatggagtcaggagaagtagcaaacaagcgt
ccctcagtgacagccgacaccatgttctttgagtcagcccagcagacatttccagtgaga
aagggcaagatgtccgacataccggaggagtcagaggacttgagtgacagccatcccgct
atcgtccctctgaaagatgctccaccaatcacagaagttaaaagccccgcccttaactac
atcactgtccactactccaagttgtccagcgtggaccaggtgcagatccacaacctgcca
ctggggggtgagaggaagcccaaggactcccccagcgttgtttacactttactgcagcag
cctctccgctga
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