Pseudochaenichthys georgianus (South Georgia icefish): 117461299
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Entry
117461299 CDS
T09629
Name
(RefSeq) ATP-dependent translocase ABCB1-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117461299
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgeo02000
]
117461299
04147 Exosome [BR:
pgeo04147
]
117461299
04090 CD molecules [BR:
pgeo04090
]
117461299
Enzymes [BR:
pgeo01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
117461299
Transporters [BR:
pgeo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
117461299
Exosome [BR:
pgeo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117461299
CD molecules [BR:
pgeo04090
]
Proteins
117461299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
Zeta_toxin
Rad17
RsgA_GTPase
AAA_30
AAA_5
AAA_28
AAA_15
G-alpha
AAA_29
AAA_7
PRK
NTPase_1
Motif
Other DBs
NCBI-GeneID:
117461299
NCBI-ProteinID:
XP_033959009
LinkDB
All DBs
Position
16:complement(27991789..28011671)
Genome browser
AA seq
1281 aa
AA seq
DB search
MDKKDEAEMMNAPKHQQNGDLSKSKKKGKKKEKEPKLPMVGAIGVFRFASGVDILLILTG
TLCAMVHGVILPLMCIVFGDMTDSFINDSAMSSIPNATAPRNSTLQAEMKGFAISYSILG
FVVLLVAYGQVAFWTLAAGRQATRIRKLFFHHIMQQDIGWYDVTETGELNTRLTDDVYKI
QEGIGDKAGRLLQAFTTFVTAFVIGFIKGWKLTLVILAVSPALAIAAGIFSKVLATFTTK
EQTAYAKAGAVAEEVLSAVRTVFAFNGQDREIKRYNKNLEDAKNMGIKKATSANFSMGLT
FLLIYLSYALAFWYGSTLVLSNEYTIGSVLTVFFTVLIGAFAVGQTSPNLQTFASARGAA
YKVYSIIDHKPAIDSYSEAGFKPDSIKGNIEFKNIRFSYPSRPDIQVLNDLSLSVKSGQT
IALVGSSGCGKSTTIQLLQRFYDPQEGSVTIDGHDIRSLNIRYLREMIGVVSQEPVLFAT
TIAENIRYGRLDVTKQEIEQAAKEANAYDFIMSLPDTFQTMVGDRGTQMSGGQKQRIAIA
RALVRNPKILLLDEATSALDAESETIVQSALDKVRLGRTTIVVAHRLSTIRNADVIAGFQ
KGEVVEMGSHSKLMEEKGVYHTLVTMQTFQKEEETDEAECEPSADEKRPLVHTNSRSSLK
NRKTTRGSSFAVSDADKEETEKSDEEKLEEDENIPPVSFFKIMRLNIPEWPYILVGTICA
IINGVMQPLFAIIFSNIITVFAHLDPAVVRTRASYFSLMFVLIGAVSFVAMFFQGFCFGK
SGELLTLKLRLGAFKAMMRQDLGWFDNPKNSVGALTTRLATDAAQVQGATGVRMATLAQN
LANMGTSIIISFVYGWELTLLVLSVVPFMAVAGAVEMKALTGHAAEDKKELEKAGKIATE
AIENIRTVVSLNREPKFESLYQENLEIPFRNSQKNAHVHGLTFSFSQAMIYFAYAGCFRF
GAWLVEENRMDIQGVFLVVSAILYGAMALGEANSFAPNYAKAKTSAAHLMALMGREPAID
NLSQAGESPDKFDGNVQFDSVMFNYPSRPDVQILQGLNLKVRKGETLALVGSSGCGKSTT
IQLLERFYDPREGRVLLDNKNAQELNIHWLRSQIGIVSQEPVLFDCTIAENIAYGDNSRI
SSQAEIEEAAKAANIHSFIDSLPQKYNTQAGDKGTQLSGGQKQRVAIARAILRNPKVLLL
DEATSALDTESEKVVQEALDEASKGRTCIIVAHRLSTIQNADRIAVFKGGVVVEEGTHQQ
LLAKKGFYFMLVTTQMGHGRE
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atggataagaaggacgaagcggaaatgatgaacgcacccaaacaccaacaaaatggggat
ttaagtaaaagcaagaagaaaggaaagaagaaagagaaagaaccaaagttgcccatggtt
ggcgccattggtgtgtttaggtttgcaagcggcgtggacattctgttgatcctgactggg
acgctctgtgctatggttcacggtgtcattcttcctctcatgtgtattgtgttcggggac
atgacagacagctttataaatgactctgcgatgagcagcatccccaatgccacagcacca
agaaacagcacattacaagcagaaatgaaggggtttgccatcagctactccatcctggga
ttcgtcgtgctgctggttgcctacgggcaggtggccttctggacgctggccgctggacgg
caggccacacgcatccgcaagctgtttttccaccacatcatgcagcaggacatcggctgg
tacgatgtcactgaaacaggagagctcaacacgcgtctcacagatgatgtctataagatc
caagaaggaattggcgacaaagctgggaggcttctccaggcctttaccaccttcgtcaca
gcgtttgtcatcggcttcatcaaaggctggaagctcaccctcgtcatcctggctgttagc
cctgcgctggccattgcagctggaatcttctccaaggtgctggcgactttcactactaaa
gagcagactgcatatgccaaagctggagctgtggcagaagaggtgctctctgctgtccgg
acagtgtttgccttcaatggtcaagacagagaaatcaagagatacaataagaacttggag
gatgcaaagaatatgggaataaagaaggcgacatctgctaacttttccatgggcctcacc
ttcctgttgatctacctgtcctacgctctggccttctggtacggaagtacgctcgtcctg
agtaatgagtacaccattggatccgtactcactgtgttcttcactgtgctgattggagcg
ttcgctgtgggacagacctctcccaacctccagactttcgccagcgcccggggagctgca
tataaagtgtacagcattattgaccataaaccggccatcgacagttattcagaggccggc
ttcaagcctgactccatcaaaggaaacattgagttcaagaacatccgcttcagctacccc
tcaagaccagacatccaagttttaaacgacttgtctctgagtgtgaagagtggacagacc
attgccttggtagggagcagcggctgtgggaagagcacaacgatccagctgctgcagagg
ttctacgatcctcaggaaggatctgtgactattgacgggcacgacatccgttctcttaac
atccgctacctgagagagatgatcggcgtggtgagtcaggagcctgttctcttcgccacc
accatcgcagagaacatcagatacggtcgacttgacgtgaccaaacaggagatcgaacaa
gctgccaaggaggccaatgcatacgacttcattatgagccttcctgacacgtttcagacg
atggtcggagaccgaggaactcaaatgagtggcggacagaagcagaggatcgcaattgct
cgagctctagtccgcaaccccaaaatccttctgttggacgaagccacatctgcgcttgat
gctgagagtgagaccattgtgcaatctgcactcgacaaggtccgactcggtcgtaccacc
atcgttgttgcccaccgcctgtcaaccatcagaaatgctgacgtcatcgctggcttccag
aaaggtgaagttgtagagatggggagtcacagcaaactgatggaagaaaagggagtctac
cacacactggtcaccatgcagactttccagaaagaggaggagacggatgaggcagagtgt
gagccgtctgctgatgagaagagaccgttagtccataccaactctcgctcctctctgaaa
aataggaagaccacaagaggctcctccttcgctgtctcagatgcagacaaagaggagaca
gaaaaatcagatgaggagaaattggaggaggatgaaaatattccccctgtgtcgttcttc
aaaataatgcgtctcaacattcctgagtggccttacattttggtggggacgatctgtgcc
atcatcaacggcgtcatgcagccactgttcgctatcatcttctccaacatcatcactgtg
tttgcacatctagatccagccgtcgtcaggacaagagcttcgtacttttctctgatgttt
gttcttattggagcggtgtcctttgtcgccatgtttttccagggcttctgttttgggaaa
tctggagagctcctgactcttaaactgagactcggggccttcaaagccatgatgagacag
gaccttggctggtttgacaaccccaaaaacagtgttggagcgctcactacgagactggcc
acagacgcagcccaagtgcaaggggctacaggagtgcgtatggccaccctggcccagaat
ctcgccaacatgggcaccagcattatcatctccttcgtgtacggctgggagctgaccctg
ctcgtcctgtcggtggtgcccttcatggcggtggccggcgctgtggagatgaaggcgctc
actggacacgctgctgaagacaagaaggagctggagaaggctggaaagattgctacagag
gccattgagaatatccgtactgttgtctcccttaacagagaaccaaagtttgagtctttg
tatcaggaaaacttagaaataccattcaggaactcccagaaaaatgcccacgtgcacggt
ctcaccttctccttcagccaggccatgatctacttcgcctacgcgggctgtttccgcttt
ggagcttggcttgttgaggagaacagaatggatattcagggagtattccttgtggtttct
gctattctgtacggagccatggctctcggagaggccaactccttcgctccaaactacgct
aaggccaaaacctcagctgcccacctcatggcactgatgggcagagagcccgccatcgat
aatctatcccaggcgggagagtcaccggacaaatttgatggtaatgtgcaatttgacagt
gttatgtttaactacccgtcacgccctgatgtgcaaatcctgcaagggctgaatctgaag
gtgaggaagggagagactctggccttggtggggagcagtggctgtggaaagagcaccacc
atccagctgctggagaggttctacgaccccagagaggggagagtgcttctggacaataaa
aatgcacaagagctgaacatccattggttgagatctcagataggcatcgtgtcccaggag
cctgtgctgtttgactgcacaatagccgaaaacatcgcctatggagacaacagccgcatt
tcatcgcaggcggagatagaggaagctgccaaagcggccaacatccacagcttcatcgat
agcctgccacagaagtacaacactcaggccggtgataagggaacgcagctgtcaggtggt
cagaagcagcgtgtagccatagcccgagctatccttcgcaaccccaaagtgctgcttctg
gatgaggccacctccgcactcgacactgagagtgagaaggtggtgcaggaggcgttagac
gaggccagtaagggcaggacgtgcatcattgtggcccaccgtctgtccaccatccaaaac
gcagaccgcatcgctgtcttcaagggaggagtggtggtggaagaggggacacatcaacag
ctgctggccaaaaagggattctacttcatgctggtcaccacacagatgggacacggtagg
gaatag
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integrated database retrieval system
