Pseudochaenichthys georgianus (South Georgia icefish): 117461328
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Entry
117461328 CDS
T09629
Name
(RefSeq) collagen triple helix repeat-containing protein 1-like isoform X3
KO
K25700
collagen triple helix repeat-containing protein 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pgeo03037
]
117461328
Cilium and associated proteins [BR:
pgeo03037
]
Other cilia and associated proteins
Stereociliary proteins
117461328
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CTHRC1_C
Collagen
Motif
Other DBs
NCBI-GeneID:
117461328
NCBI-ProteinID:
XP_033959037
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Position
16:16809025..16815643
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AA seq
257 aa
AA seq
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MMSPLIARLLLLVCLALPLYGVEKVRNRGYRKDPDADKCAENDAEKPNCTTRHSGEERSA
NLNKMFGSCVQGPAGTSGREGNPGANGIPGTPGIPGRDGPKGEKGECINEIFEEPWRPNY
KQCAWNSLNYGIDLGKVADCTFTKLRTDSALRVLFSGSLRLKCKNACCQRWYFTFNGAEC
AGPLPIESIIYLDQGSPELNSTINIHRTSSVEGLCEGVKGGLVDVAVWVGTCDDYPRGDA
STGWNSVSRVIIEELPK
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctcctctcattgcccgcctgctgctgcttgtctgcttggcgttacctctctat
ggcgtggaaaaggtgagaaatagaggataccgaaaggatcctgacgctgacaagtgcgct
gaaaatgatgcagaaaagcccaactgcactactagacactctggagaagaaagatctgct
aatttgaacaaaatgtttggcagttgcgtgcagggtccagcaggcacctctggcagagag
ggtaaccctggtgccaacggcatcccgggaacgccgggtattccaggtcgcgacgggccg
aaaggcgagaaaggcgagtgcatcaacgagatctttgaagagccctggaggcccaactac
aagcagtgtgcctggaactctctcaattatgggattgacctgggtaaagtagctgactgt
acgttcaccaagctgcgtacagacagcgccctcagagtcctcttcagcggttccctcaga
ctcaagtgtaagaatgcatgctgccagaggtggtacttcaccttcaatggagcagagtgc
gccggacccttgcccatagagtccatcatctacttagaccaaggaagtcctgagctcaac
tcaaccatcaacatccacagaacatcctcagttgaagggctgtgcgagggtgtcaaagga
gggctggtggatgtggccgtgtgggtggggacctgcgacgactatcccagaggtgacgcg
tctacagggtggaattcagtatccagggttatcattgaggagctgcccaaataa
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