Pseudochaenichthys georgianus (South Georgia icefish): 117461337
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Entry
117461337 CDS
T09629
Symbol
sntb1
Name
(RefSeq) beta-1-syntrophin isoform X1
KO
K24064
beta-syntrophin
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117461337 (sntb1)
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Motif
Pfam:
PH_17
PDZ
PH
PDZ_6
PDZ_2
PH_9
Motif
Other DBs
NCBI-GeneID:
117461337
NCBI-ProteinID:
XP_033959048
EnsemblRapid:
ENSPGEG00000016402
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All DBs
Position
16:22648644..22697393
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AA seq
551 aa
AA seq
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MAVVIETGVSGAFGVQKSGFVEVLVRERWHKVLVNLNEEALTLSCEEGCVNDNGDDNVNS
NGVTNGSYLDNNNTNSNNGPQTVRTAFTDLPERVPEAIANRKRCVKLSKQEIGGLGISIK
GGKENKMPILISKIFKGLAADQTQALYVGDAILSVNGMNLRDATHDEAVQALKRAGREVT
LEVKYMREATPYVKKGSPVSEIGWETPPPESPRLGSHSLTSCSPFDPPSSPTQPSLSLQG
DRRCIPLRMCCVTRAMTTPDPENRQLELHSPDARHTVVLRCPDQPSALSWFSAMHSVTST
LSQRALAEVIQNTARTGVAGSREIRHLGWLAGKTESEKQSWKPVLVVVTEKDLLLYESLP
RGKEAWQSPAHTYPLLATRLVHSGPDRGSPHSGTELFFATRTGTRLGIETHLFRAETTKD
LSLWTRQIVNGCHASAEMIKEVTTSCLYQSQECRLVIHYEQGFSVLADPSLGEGGDGEER
GAHTPTRPRVLLSYPYEKLKMSSDDGVRLLFLDFGEKEGVIQLDLHSCPKPMVFILHSFL
SAKISRLGLVA
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggtaatcgagacgggagtttcaggtgccttcggagtgcaaaaaagtggattt
gtggaggttttggtgcgggagcggtggcacaaagttttggtcaacttaaacgaggaagcg
cttacgttaagctgcgaggagggctgcgtaaacgacaacggggacgacaatgtcaactcc
aacggggttaccaacggatcctacctggacaacaataacaccaactccaacaacggcccc
caaactgtgcgcaccgcgttcacggacctgccggagcgagtgcccgaggcgatcgccaac
agaaagcggtgcgtcaagctgagcaagcaggagatagggggactggggatcagcatcaag
ggcgggaaggagaataaaatgcccattctcatcagtaagatattcaaagggctcgcagcg
gatcagacccaggctctgtacgtgggggacgccatcctgtccgtgaacggcatgaacctg
cgggacgcgacccatgacgaggctgtgcaggcgctgaaacgggccgggagagaggtgaca
ctggaagtgaagtacatgcgtgaggccacgccgtacgtcaaaaagggctcccctgtgtcg
gagatcggctgggaaaccccccctcctgagtctcctcgccttggcagccactccctcacc
tcctgctcccccttcgaccccccaagctctcccacccagccttcactgtccctgcagggc
gacagaaggtgcataccactcaggatgtgttgtgtaacccgagccatgaccacacctgac
ccagagaacagacagctggagctgcactcccctgacgcccggcacaccgtggtgctgcgc
tgccccgaccaaccctcggccctgagctggttctccgccatgcactctgtcacctccact
ctgtcacagcgggcgctggcagaagtcatccagaacacagccaggaccggggtggctgga
agccgagagatacgacacctgggctggctggcagggaagacggagagcgagaagcagagc
tggaagccggtgctggtggtggtgacagagaaagacctgctgctgtatgagagcttaccg
cgaggcaaggaggcctggcagagccctgctcacacctacccactgttagcaacacgtttg
gtccactctggtcctgaccgggggtcgccgcactctggcaccgagttgttcttcgccact
cggactggcacacggctcggtatcgagactcacctgttccgggccgagaccaccaaggat
ctgtccctgtggaccagacaaatagtcaatggatgtcacgcctcagccgagatgatcaaa
gaggtcacgacaagttgtctgtaccagagtcaggagtgccggctggtgattcactatgag
caaggcttctctgtgctggctgacccttcactgggggaggggggagacggggaggagaga
ggagcccacacacctaccaggccccgggtgctcctctcctacccctacgagaaactaaaa
atgtcttcagatgatggagttcgcttgctctttcttgactttggagaaaaggagggagtg
atacagctggatctccactcatgtccgaagccgatggtcttcatcctccactccttcctc
tctgctaagatctcccgcctgggtctggtggcctga
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