Pseudochaenichthys georgianus (South Georgia icefish): 117461343
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Entry
117461343 CDS
T09629
Name
(RefSeq) ataxin-1-like
KO
K23616
ataxin 1/1L
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117461343
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Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
117461343
NCBI-ProteinID:
XP_033959058
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Position
16:26784857..26798188
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AA seq
811 aa
AA seq
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MKSNQERSNGCLPPKKREILALEQRPVVVAAPPAAVMADSPHTENLAWLASVASERCRSR
DAESPRCTISSTSSSSPATSIYSSAAPLSAMPLTSLPAVYPTAMPQQAGTIQFAQLGPNV
QFISSGPYAGYISSHIISANASSAHNSSTLGQRSHLDGYTTALISPNNKGEQQFQIGLSP
TELTPVSLPGSPQVTSQYIHLDSRTPLTVSGNTMSSQTAHLQLHPHTTVLPQTLTLAPSQ
LLVQYADGSIGKRPEGHGKGLLNGELEVIKQTKTHSHHLNHHQVHSYEARHILLPADYGH
NHGGLQTSLVLVAQPNHGIDRDCGTNKISFVQTEKGGIILGKPVSRSSSFTSLSSSDLVK
SVAPHTVIQTTLSHEEMPANLYSSTQPPIIGYITSANQHGVSYHAALPQHLVIPSGQSLL
IPVSGTNNGTEIEVSRTVTATSTPQISTAMPHAYLATALSKCEALGPDGNQQPPAVAPAP
PMPVLPSHPAPVVVSTPSPTPASVPSPTHVSIQASHSVSPPSSPVALPPFFMRGSIIQLA
DGELKRVEDLKTEDFIQSAEISSELKIDSSTVERIDNGQSPNAVVIQFSVGELKAQVCVE
VLLEYPFFVFGQGWSSCCPDRTTQLFELSCAKLCVGDVCVSLTLRGLRTTSLTEGQALGT
KLKTGPPSESCHNAEATVRNSMSPNAAGRNSGLLMKASSADRLEREQGPGPGEGVYGAGP
MLAVSGNGEERQESVKTDTPALTKTQCGEQERPTSRKRRWSAPERDQTERAEEEPPLTLP
KPSFIPHEVKISIEGHSSTGIERRLSKRIDC
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccaatcaagagcgcagtaatggatgcctgccaccaaagaagcgtgagatcctg
gctctggagcagaggccggtggtggtggctgcccctccagctgcggtgatggccgacagt
ccccacaccgagaacctagcttggctggcaagtgtagccagtgaacgctgcaggtccagg
gacgcagagagcccgagatgtacgatttcctcaacttcctcctcttctcctgccacttct
atctattcctcggccgctcctctgtctgcaatgcccctcacctctctgccggcagtttac
cccaccgccatgccccagcaggccgggactatccagttcgctcagctgggacccaacgtt
cagttcatcagctccggaccctacgccggctacatctcctctcacatcatctcagccaat
gctagctctgcacataacagctctaccttaggacagcgttcccatctcgatggttacacc
actgctctcatctcccccaacaacaaaggggagcagcagtttcaaataggcctttctccc
acagaactgactccggtgtcacttccgggctctccccaggtcaccagccagtacattcat
ctggacagcagaacacctctgactgtcagcggaaacacgatgtcttcacagaccgcccac
ctccagctccaccctcacacaaccgtcctccctcaaacgctcaccctggctccctctcag
ctcttggttcagtatgcagatggttcaataggaaagagaccagaagggcatggtaagggt
ttactgaacggggaactagaggttatcaaacagactaaaactcacagtcatcatttgaac
catcaccaagtccacagctatgaggcgagacacatcctcctgcctgcagactacggtcac
aaccatggaggactccagacctccctggttctggtggcccagcccaaccacggaatagac
cgcgactgtggcacaaataagatctccttcgtgcagactgagaaaggaggcatcatcttg
gggaaaccagtgtccagatcttcttccttcacctccctctcttcctcagatttggttaag
tcagttgctcctcacacagtcatccagaccactctttcccacgaggagatgccagccaat
ctctactcctccacacagccacctatcattggctatatcaccagtgcaaatcagcatggt
gtcagctaccatgcggcgctgcctcagcacctggtcatcccgagcggtcagtcccttctc
atcccagtcagcggcaccaataacggcacagaaattgaagttagtcgtactgttactgct
acaagcacccctcagatctccactgccatgccacatgcctatctggccacagctctgtcc
aagtgtgaggctcttgggccggatggaaaccaacaaccccctgccgtcgctccggcaccg
ccaatgccagttctgccctcacacccggctcccgtggtggtgtcaacgccctccccgacc
cctgcttccgtccccagtcccacccatgtttccatccaagcctcccactccgtctcccct
ccttcttcccctgtggcgcttcctccattcttcatgcgaggctccatcatccagctggcc
gatggggagctgaagcgcgtggaggatctgaaaacggaggacttcatccagagtgctgag
ataagcagtgagctgaagattgactcgagcactgtggagcgtattgacaacgggcagagt
cctaatgctgtggtcatacagttctctgtgggagagctcaaagcccaggtgtgtgtggag
gtgctgttggagtatcccttctttgtgtttggccagggctggtcctcctgctgcccagac
cggaccacccagctgtttgagctgtcgtgcgctaagctgtgtgtgggcgacgtgtgcgtg
tcgctgaccctccgcggcctgaggaccacctcactaacggagggccaggctttgggcacc
aagctgaagaccgggcccccctcagagtcctgtcacaatgcggaggccactgtaagaaac
agtatgagtccaaacgcagcgggcagaaacagtggcctcctcatgaaggcttccagtgca
gacaggctggagagggagcagggaccaggaccaggggagggggtctacggagcgggacca
atgctggcagtctctgggaatggagaagagagacaggaatcagtgaaaacagacacgcct
gctctaaccaaaacacaatgtggtgagcaagagagacccacatcccgcaagagacgctgg
tcagctccagagcgagaccagactgagagagccgaggaggagccccctctgactctgccc
aaaccctccttcatccctcacgaggttaaaatcagcatagagggacactccagtactggc
attgagaggcgcttgagcaaaagaatagactgctga
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