Pseudochaenichthys georgianus (South Georgia icefish): 117461394
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Entry
117461394 CDS
T09629
Symbol
chrnb2
Name
(RefSeq) neuronal acetylcholine receptor subunit beta-2
KO
K04813
nicotinic acetylcholine receptor beta-2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04080
Neuroactive ligand-receptor interaction
pgeo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117461394 (chrnb2)
04082 Neuroactive ligand signaling
117461394 (chrnb2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pgeo04040
]
117461394 (chrnb2)
Ion channels [BR:
pgeo04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
117461394 (chrnb2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
DUF2417
DUF2754
Motif
Other DBs
NCBI-GeneID:
117461394
NCBI-ProteinID:
XP_033959117
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All DBs
Position
16:28394850..28415292
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AA seq
542 aa
AA seq
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MMDAWLLLLALLAIAGGGLGADTEERLVEHLLNPAHYNKLIRPATNGSELVTVQLMVSLA
QLISVHEREQVMTTNVWLTQEWQDYRLTWIPEEFDGMLKVRLPSKHIWLPDVVLYNNADG
VYEVSFYSNAVVSHDGSIFWLPPAIYKSACKIEVKHFPFDQQNCTLRFRSWTYDRTEIDL
VLRADVASMDDFTPSGEWDIIALPGRRNENPADPTYVDITYDFIIRRKPLFYTINLIIPC
VLITSLAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLDVPLVGKYLMFTM
VLVTFSIVTSVCVLNVHHRSPTTHTMPPWVKLVFLNKLPALLFMRQPRNSCERQRLRQRR
RAQEQKEGGRSGEAGALMVGLGLGNAGGSGGGTSTGVFSKEDSEPCTCYVNRASVKQFGG
DLGGAGGSMDGLNRVRESREGGAGNVPRGKQAAGGPALTQTLLAQACPGFEEAVEGVRFI
ANHMKSEDDDQSVSEDWKYVAMVIDRLFLWIFVFVCVFGTLGMFTQPLYQNYTVKTITSS
PG
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgcctggctgctgctgctggctctcctcgccattgcgggaggaggcctgggg
gcagacacagaggagcgcttggtggagcatctcctaaacccggcccactacaacaaactg
atccgtcctgccactaatggctccgagctggttaccgtgcagctgatggtgtcgctggcc
cagctcatcagcgtgcatgaacgagagcaggtgatgaccaccaatgtctggctcacacag
gagtggcaggactatcgtctgacttggatccctgaggagtttgatgggatgttgaaggtc
aggctgccctcaaaacacatctggctgcctgacgttgtgctctacaacaatgctgatggg
gtgtacgaggtgtcgttctactctaacgcggtggtgtcccacgatggcagtatcttctgg
ttgcccccggccatctacaaatccgcctgtaagatcgaggtgaagcacttccccttcgac
cagcagaactgcacgctgcgcttccgctcctggacctacgaccgcaccgagatcgatctg
gtgctgcgagctgacgtggccagcatggacgacttcacgcccagcggtgagtgggacatc
atcgcgctgccaggcagacgaaacgagaacccggccgaccccacctacgttgacatcacg
tacgacttcatcattcgcaggaagcctcttttttacaccatcaacctcatcatcccgtgc
gtgctcatcacctctctggccatcctggtgttctacctgccctccgactgtggagagaag
atgacgctctgcatctccgtgctgctcgccctcactgtgttcctgctgctgatctccaag
attgtcccccccacttctctagacgtccctctggtggggaagtacttaatgttcactatg
gtccttgtgactttctctatcgtcaccagcgtgtgtgtgctcaatgtgcaccaccgctcc
cccaccacacacaccatgcccccctgggttaaactggtgttcctcaacaagctccctgct
ttgctcttcatgcggcagcccaggaacagctgtgagcgccagcggctgcgccagagaaga
cgggcccaggagcagaaggagggggggcgcagtggggaagcaggggccctgatggtgggg
ctagggctgggcaacgctggggggagcggaggggggacctccacaggggtgttcagcaag
gaggacagtgagccctgtacctgctatgtgaaccgggcgtctgttaaacagttcggaggg
gatctgggaggagcaggagggtccatggatggtctgaacagggtgagggagagccgggag
gggggtgctggaaacgtgccccgggggaagcaggcggctggaggacctgctctgactcag
accctgctggctcaagcctgtccgggcttcgaggaggccgtggaaggggttcgcttcatc
gccaaccacatgaagagtgaggatgatgatcagagtgtgagcgaggactggaagtacgtt
gccatggtgattgaccgcctcttcctgtggatcttcgtgtttgtgtgtgtgttcggcacg
ctgggcatgttcactcagccgctctaccagaattacacagtcaagaccatcaccagctcg
ccaggctga
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