KEGG   Pseudochaenichthys georgianus (South Georgia icefish): 117461492
Entry
117461492         CDS       T09629                                 
Symbol
atg12
Name
(RefSeq) ubiquitin-like protein ATG12
  KO
K08336  ubiquitin-like protein ATG12
Organism
pgeo  Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04068  FoxO signaling pathway
pgeo04136  Autophagy - other
pgeo04140  Autophagy - animal
pgeo04621  NOD-like receptor signaling pathway
pgeo04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:pgeo00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04068 FoxO signaling pathway
    117461492 (atg12)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    117461492 (atg12)
   04136 Autophagy - other
    117461492 (atg12)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    117461492 (atg12)
   04622 RIG-I-like receptor signaling pathway
    117461492 (atg12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pgeo04131]
    117461492 (atg12)
   04121 Ubiquitin system [BR:pgeo04121]
    117461492 (atg12)
   03029 Mitochondrial biogenesis [BR:pgeo03029]
    117461492 (atg12)
Membrane trafficking [BR:pgeo04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    117461492 (atg12)
Ubiquitin system [BR:pgeo04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   117461492 (atg12)
Mitochondrial biogenesis [BR:pgeo03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    117461492 (atg12)
SSDB
Motif
Pfam: APG12 ATG8
Other DBs
NCBI-GeneID: 117461492
NCBI-ProteinID: XP_033959278
LinkDB
Position
16:complement(30188961..30191419)
AA seq 117 aa
MSDNAESPTETPKEESQPPPDDTSTNDEKKKIDVLLKAVGDTPIMKTKKWAVERGRTILS
LSQFISRFLKIEGSEQLFIYVNQSFAPSPDQEVGILFDCFGSDNKLVLHYCKSQAWG
NT seq 354 nt   +upstreamnt  +downstreamnt
atgtctgacaatgcagagtccccaacagaaacgccaaaagaggagtcacaaccgccgcca
gacgatacgtcgacaaatgatgagaagaaaaaaattgatgtgctgctgaaggcagtgggg
gacactcctataatgaaaacaaagaagtgggcagtggagcggggtcggacgatactgtcc
ctgtctcagttcatctctcgcttcctcaagattgaaggcagtgaacaactgttcatttat
gttaaccagtcattcgccccttcaccggatcaagaagtagggatcctgtttgattgtttt
ggcagtgataacaagctggttctacattactgtaaatctcaagcctggggttga

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