Pseudochaenichthys georgianus (South Georgia icefish): 117461531
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Entry
117461531 CDS
T09629
Symbol
tlr21
Name
(RefSeq) toll-like receptor 21
KO
K18808
toll-like receptor 13
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pgeo04054
]
117461531 (tlr21)
Pattern recognition receptors [BR:
pgeo04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
117461531 (tlr21)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
TIR
TIR_2
LRR_1
LRR_9
DHU1_N
Motif
Other DBs
NCBI-GeneID:
117461531
NCBI-ProteinID:
XP_033959338
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All DBs
Position
16:39323220..39333713
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AA seq
978 aa
AA seq
DB search
MASLIDWLCSVAFVLGAVQMASGYSYNNCIEDAYWKGSFKCVNRKETKITNITKDLPSST
INLTISINHLGVIPDNSFGHLRKLEQLRLDNNNITTIGQFAFKNLLHLTSLNLSFNQISE
LNPAVFKDLHNLTFLSLTNNTLKRLPGGIFSTLLKLETLIMSQNHLNNFSEVAESVSHLV
NLTKIDICFNNLTSLSHSNVSLPKSLTTLYLSRNNLSTLGCNQSFLENIKVLDLSYNQRL
PTMAFEGVDLRRVSYLRLRSTSVKVKEFLNISNINAGHVDFSDMGLENDTEFCILLKKKV
KWIKNLSLGSNKIVTLPKNFLNQCPIVTQALDLSHNNLKSISCLNFLHRQTRLKSVNLEH
NHLNFLKSCRKQHMGNLTNITDLSYRYNRIQSVGSYAFSRTPNITTLQLNINTIAYLHRK
ALMGLNKLETLRLDNNLLTDLFKETFEDTFNLKILNLRNNRISVIFNRTFHSLKNLNTLD
LGGNKISHITPSGLDGLQSLSKFYLDGNNLQTIDTSLYRVFQDTLTVLDLQSNQFHFLKE
TYSSPFMNLSKLKDLKLDGQRPHGLIVLPKHFFRGLHSLKSLYLTNNNIINLPPDAFDDL
TGLSFLTLDNCCVGVTQLRPGIFKNLRNLTRLIVENMGIQNFTKEVFGNLTKLHTLQLNR
NVMQSIRVDALESLPKLHYLDIRNIPLSCTCENSLLQNWTVHNQNAQVVYLYNLLCPNQA
KSRFYNFDTKVCYIDLEEYFFFSTAVVIFLFTVAPLLYVKLYWKMKYGYYVFISWFGEQW
RRLREKEENCKYDAFISYNSSDEQWVKDQLIPNLEGNGSSFKLCLHHRDFELGRNIVDNI
VSAVYSSRKTICVVSRNFLKSEWCSLEIQLASYRLFDEHRDVLLLVFLEQISERQVSCYH
RMRKVMLKKTYLQWPSSDCTDPTQAQALFWNQLRRAIRSGSIQEAEEINNEVHEEEEPGN
VDTHTSENMTCLVENVHL
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtctaattgattggctgtgttccgttgcatttgttcttggtgcagttcaaatg
gccagtggttacagctacaacaactgcattgaagacgcctactggaaaggaagctttaaa
tgtgtcaatcggaaggagacgaagattacaaatattacaaaagacctgccgtcatctact
atcaatctcaccatctcaattaatcatctgggggtcattcccgacaacagctttggtcat
ctccgaaaacttgagcaactccgactagataataataacataacgaccatcggtcaattt
gctttcaagaacctgcttcatctcacgtctctgaacttgtccttcaaccaaatatcagag
ctcaaccctgctgtgtttaaggacctgcacaacctcacctttctctcgctgacaaacaat
acattaaagcggctccccggaggcattttctccactcttctcaaactggaaactttaatc
atgagccaaaaccatctgaacaacttttcagaggtcgctgagtctgtgtcacatttagta
aatctgacaaaaatagatatttgcttcaacaatttgacctctctcagccactcaaatgtg
tcactgcctaaatccctcactacattatatttgtctcgaaataatctgtctacattagga
tgtaatcaatcgtttctcgagaacatcaaggtgctggatttgtcttacaatcagaggctg
cctacgatggcttttgaaggagtggatttaaggcgtgtaagctatctgcgtttgcgttca
acaagtgtcaaggtcaaggagtttttaaacatcagcaatatcaatgcaggtcacgttgat
ttctctgacatgggccttgaaaatgacacggagttttgcatattgttaaagaaaaaagtg
aaatggataaaaaatttaagcctgggtagtaacaagattgtgactctgccaaaaaacttt
cttaaccaatgtcctattgtcacacaggctttggatctttcccacaataacctgaaaagc
ataagttgtcttaactttctccatcgacagacacggttaaaaagtgtcaatttagaacac
aaccatctcaacttcctgaaatcttgtagaaaacaacacatgggtaatttaaccaatata
acagatctgagctatcgctacaaccgcatccaatcagtcggctcttatgctttctcccga
acaccaaatatcacgacactacagcttaacataaacacaatagcttatctccatcgtaaa
gctctcatggggttaaacaagctggagacactccgtctggataataacctcttaactgat
ttgttcaaggagacctttgaagatactttcaacctgaaaatcctcaacctacgcaacaat
cgtatctctgtcatttttaataggaccttccacagtttaaagaatcttaacacactggac
ctaggaggaaataagattagtcatatcacgccatctggccttgatggactacaaagtctg
tccaaattctacctcgatggaaacaacctccaaacgattgacacttccctctatcgtgta
tttcaagacacgctaactgttctggatttacagagtaatcagtttcacttcctcaaggaa
acgtacagttcaccatttatgaacctcagcaaactgaaggatctgaaactggacgggcag
cgaccgcatggcctcatagttttacccaaacattttttccgtggcctccactccctgaaa
tctctgtatctaacgaacaataacatcatcaatcttcctcccgatgcctttgatgatctg
acaggcttaagtttcctcacgttagataactgctgtgttggggtgacacaactacggcca
ggaatctttaaaaatctaagaaatttgacccgattgattgttgaaaatatgggtattcag
aacttcacaaaagaggtttttgggaatctcacaaagttgcacacactgcagctcaaccgc
aatgtaatgcagagtattcgtgtggacgcactcgaaagtttacctaaacttcactacctc
gacatacggaatattcctctaagctgcacctgtgaaaacagcttgctgcaaaactggaca
gtgcacaaccaaaatgcccaggtggtctatctctacaatcttctgtgcccaaaccaagca
aaaagcagattctacaactttgacaccaaagtgtgttacatagatttggaagagtacttc
ttctttagcacagcagttgtgatcttcctgttcacagtagctcctttactgtatgtcaaa
ctgtactggaaaatgaagtatggctactatgtgttcatttcttggtttggtgagcagtgg
cgcagactcagagagaaggaggaaaattgcaaatatgacgcatttatttcctataactcc
tctgatgaacaatgggtcaaggaccagttaattccgaacctggagggcaatggatcgtct
tttaaactttgtctacatcacagggactttgagcttggccgcaatattgtggataacatt
gtctctgctgtatatagcagccgcaaaactatctgtgtggtgagcaggaatttcctcaag
agtgagtggtgttctctggaaatccaactggccagctaccgcctcttcgatgagcaccgg
gacgtcctgctgcttgtgttcctggagcaaatctcagagaggcaggtgtcgtgctatcac
cgcatgaggaaagtcatgttgaaaaagacttatctgcagtggcctagctcagactgcact
gacccgacgcaggcccaagctctgttttggaatcagctacgaagggcaataagatccggg
agcatacaagaagcagaggaaattaacaatgaagtgcatgaagaagaggaacctggaaat
gttgacactcacacatcagaaaatatgacttgcttagttgaaaatgttcatttgtga
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