Pseudochaenichthys georgianus (South Georgia icefish): 117461539
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Entry
117461539 CDS
T09629
Symbol
lrrc4cb
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117461539 (lrrc4cb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pgeo04515
]
117461539 (lrrc4cb)
Cell adhesion molecules [BR:
pgeo04515
]
Immunoglobulin superfamily
NGL family
117461539 (lrrc4cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
V-set
ig
LRR_9
Ig_2
LRRNT
Ig_6
Syndecan
Motif
Other DBs
NCBI-GeneID:
117461539
NCBI-ProteinID:
XP_033959361
LinkDB
All DBs
Position
3:21216403..21258341
Genome browser
AA seq
631 aa
AA seq
DB search
MLNTMISSLQRQTMRGRRLKGALSNPLFVLLLALQILVVAGLVRAQTCPSVCSCSNQFSK
VICTRRSLRDVPDGISTNTRYLNLQDNLIQVIKVDSFKHLRHLEILQLSKNHIRNIEIGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISDGAFKDLSNLRYLNLGMCNLKEIPNILPLIRLEELEMSGNQLTVVKPSAF
LGLVNLQKLWMMHAQIQTLERNSFDDLQSLVELNLAHNNLTFLPHDLFTPLHRLERVHLH
HNPWNCNCDILWLSWWLKETVPANTSCCARCHSPAVYKGRYIGELDHSYFQCDVPVIVEP
PSDLNVTEGMGAELKCRTSSLTSISWLTPNGSLVTHGAYKVRLSVLNDGSLNFTSVTMQD
TGTYTCMVSNTAGNISASAVLNVTSVENSGVTYFTTVTVETIESPGDYSQTPLPPFGWVS
SSTTKGTPIFTRTTERTYTIPVLDPDGEGALNGLDEVMKTTKIIIGCFVAITLMAAVLLV
IFYKMRKQHNQQDPDGPASSMEVITVEEELAGVAAMERHLSLPPLEHYNHYNTYKSSYHH
GPMLSTIHSSATQEPLLIQACSKDNVQETQI
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacacaatgatctcctccctccagcgccagacaatgagaggtcgtaggctgaag
ggggcgctgtccaaccccctattcgtgctgcttttggcccttcagatcctggtcgtggct
gggctggttcgcgctcagacctgtccttctgtctgctcatgcagcaaccagttcagcaaa
gtaatatgcacccgccgaagtctacgggacgtcccagatggcatttccaccaacactcgc
tacctgaacctccaggacaacctcatccaggtcatcaaagtggacagtttcaaacatctg
cgccatctggagatcctgcagctgagcaaaaaccacattcgcaacattgaaattggcgcc
tttaatggactggccagtctcaacactttggagctctttgataatcggctcacgacaatc
cccaatggagcatttgagtacctgtccaagctgaaggaattgtggctacggaacaacccg
atcgaaagtataccatcttatgccttcaaccgagtcccctcgcttcgaaggctggatcta
ggtgagctcaaacgtctctcttacatttctgatggagccttcaaggacttgagcaacctg
cgctacctaaacctgggaatgtgcaacctcaaggagatcccaaacattttacctttgatc
aggcttgaagagctagaaatgtcaggaaaccagctcactgttgtcaagcccagcgcattt
ttaggattagtgaacctccagaagctgtggatgatgcatgcccagatacaaactttagag
aggaattcctttgatgaccttcagtctctggtggagctcaacctagctcacaacaacctt
acctttctaccacatgacctcttcacaccgttgcatcgcctggagcgggtccacctccat
cacaacccttggaactgcaactgtgatatcctgtggctcagctggtggctgaaggagaca
gtacctgctaatactagctgctgtgcccgttgccattcgcctgcagtctataaaggtcgc
tacattggggaattggaccacagctacttccagtgtgatgttcctgtcattgtggagcca
cccagtgacttgaatgtgacagaaggcatgggtgcagagcttaaatgtcgtacaagctcg
ctgacatccatcagctggcttacaccaaatggctcgctggtgacacatggggcttacaag
gtacgtttgtctgtactcaatgatgggtcactgaactttactagtgtcaccatgcaggac
actgggacttacacctgtatggtaagcaacacagcaggcaacatttctgcctctgctgtg
cttaatgtcacttctgtggaaaacagcggggtgacctattttaccacagtcactgtggag
accattgagtccccgggggactatagccaaacgccacttcccccatttggctgggtgtca
tcctcgacaacaaaaggtactcctattttcacaaggaccacagagcggacttacaccatt
ccagttcttgatccggatggagagggagccctcaatggcctggatgaggtgatgaaaact
accaagattatcattggctgcttcgtggccataacgctaatggctgctgttctgctggta
attttctacaagatgaggaagcaacataaccagcaggatcctgatggccctgcctcctcc
atggaggtcattacagttgaagaagagcttgcaggtgttgctgccatggagagacaccta
tcgctgcctcctctggagcactacaaccactacaacacctacaagagcagttaccaccac
ggtcctatgctcagtaccatacacagctcagccacacaggaacctttactgattcaagcc
tgctcaaaagacaatgtacaagagacccaaatctga
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