Pseudochaenichthys georgianus (South Georgia icefish): 117461601
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Entry
117461601 CDS
T09629
Name
(RefSeq) retinoic acid receptor beta-like isoform X1
KO
K08528
retinoic acid receptor beta
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117461601
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pgeo03310
]
117461601
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117461601
Nuclear receptors [BR:
pgeo03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
117461601
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
117461601
NCBI-ProteinID:
XP_033959431
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Position
16:complement(31369912..31386548)
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AA seq
444 aa
AA seq
DB search
MFDYVEFQAFGPGEIMDLYTSSTPSPASCMLQEQEPDLAAFFPELIEADWQQHRCSQSVG
SHSSSSSSDDLFASPASPLPPPRTYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSVQKNM
VYTCHRDRNCIINKITRNRCQYCRLQRCFAAGMSKESVRNDRSTRKGKKEAVKMTIMETY
ELTAELGLIVEKICRAHRETFPSLCQLGKYTTNSSCDHRIQLDLGLWDKFSELATKCIIK
VVEFAKRVPGFTGLTIADQITLLKTACLDILILRICTRYTPGQDTMTFSDGLTLTRTQIH
NAGFGPLTDQVFTFADQLLPLQMDDTESGLLSAICLVSGDRQDLEEPSKVEVLQEPLLEA
LKIYSRKRRPSMPLMFPKALMKITDLRSISAKGAERVVTLKLEIPGSMPPLIEEMLEDLE
KNCEGSREEPNTSQHTHTPTALST
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtttgactatgtggaatttcaagctttcggtcccggagaaatcatggacttgtacaca
tcctccacccccagccctgcatcgtgcatgctgcaggagcaggagccggatttggcagcc
ttcttcccggagctgatcgaggccgactggcagcagcaccggtgctcccaatccgttgga
agtcatagctccagctccagttcagacgacctgtttgccagccctgcctcccccctgccg
ccccctcgcacttacaagccctgctttgtgtgtcaagacaaatcctcaggctaccattat
ggcgtcagcgcctgcgagggctgcaagggcttcttccgccgcagcgtgcagaagaacatg
gtgtacacctgccatcgagaccgaaactgcatcatcaacaagatcaccaggaaccgctgt
cagtactgtcggctgcagaggtgctttgcagcgggaatgtccaaggagtcagtgagaaac
gacaggagcacccggaaggggaagaaggaggcggtgaagatgaccatcatggagacgtac
gagctgacggcggagctcggcctgattgtggagaagatctgcagagctcacagagagacc
ttcccctctctctgccagctggggaaatacaccacaaactccagctgcgaccacagaatc
cagctggacctcgggctgtgggacaagttcagcgagctcgccaccaagtgcatcatcaag
gtggtggagtttgccaagcgagtgcctggattcaccggcctgaccatcgctgaccagatc
actctgctaaaaactgcatgcctggacatcctgatcctgaggatttgtactcgctacact
ccgggccaggacaccatgaccttctccgacgggctgaccctgacccgcactcagatccat
aacgctggatttggaccgctgacagatcaggttttcacgtttgcggaccagctgctgccc
ctgcagatggacgacacggagagcggccttctcagcgccatctgtcttgtctctggagac
cgacaggatctggaggagccgtctaaggtggaggtgctgcaggagccgctgctggaggcg
ctgaagatttactcccgtaagcggcggcccagcatgcccctgatgttccctaaagccctc
atgaagatcacagacctgcgcagcatcagcgccaaaggcgctgagagggtggtgacttta
aagctggagatcccgggctccatgccacctctgatcgaggagatgctggaggatctggag
aaaaactgtgaggggagcagagaggagccgaacaccagccagcacacacacacaccgact
gctctcagcacatga
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