Pseudochaenichthys georgianus (South Georgia icefish): 117461752
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Entry
117461752 CDS
T09629
Symbol
carmil3
Name
(RefSeq) capping protein, Arp2/3 and myosin-I linker protein 3 isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117461752 (carmil3)
Membrane trafficking [BR:
pgeo04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
117461752 (carmil3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Sec66
Motif
Other DBs
NCBI-GeneID:
117461752
NCBI-ProteinID:
XP_033959543
LinkDB
All DBs
Position
17:complement(12803629..12919125)
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AA seq
1399 aa
AA seq
DB search
MASKDTATGFVNVSREITEGIRKVLDKQAIKFVRAIKQDTRSGKTEDRILVLASWRLYLF
AVKVPTKTEVTFNFLEIRAMNTYPEHQVVIDTDKTTYSLKLQNQEQLNHVVSHINYSLSR
VFNNSIYAPPICRAEGDVTDGSIKFSANSESSLDPQKSCGGFSETYAALCDYNGIGCKEE
VQWDVDTIYHSQDNREFNLVDFSHLDSRDLAVIVASIAYNTWFTKLHCKDMRIGSEVVDQ
VLHTVSKSNTLEELTLENAGLKSDFPQKMASALSENPASVIHSLNLAHNTLDNQGVSNLI
QQVCRLNKGLRLLNLSKTSLSSKGVVTLSQALCSSDDYSNSLLHLDLSKNPGVLSGEDAT
NLYLFLAQPNCLVHLDLSGTDCTVDSLFGALLRGCCADLSYLNLSKNSFSHRKARDSLPT
FRQFFSSAFSLTHVSLASVKVPPDMLRALFLGLSNNPHITDLHLDISSCELRSAGAAVIQ
ELFPRVACVGTLDISDNGLDADLLAVIPAFSRHPSLKHLMLGKNFNIKGRVLEEILQKLV
HLVQEEECALHSLSLADSRLRQRGTVMVNALGSNACLRKVDLSGNQLEDSGAKMLSKALQ
INTTLRSVTWDRNNTTAMGFQDVARALEHNFTLQYMPLPLSDVTQAHRSNPEKTDQALTK
IQRALLRNNQTQHFSQKQALRLHQGLVTSTAEQVMERLCVRVQQQVGVLKGSEEGEEVQT
ARQILKEARDSRALYPSLCELAHVLSVDGPVKQRLDTLAGELAKAADKELQVVVDSMVLL
CRELCPMSCSAAERLNPPLSSISEQVSIPRAAIRSALMERAAEDINRALEEVKLSVVSYL
TNSIVDQILQELYTTHKTLLRQVSQAKRWDDVGTGRRTVRQSRIAESLEFPDEDFGVNLG
IDTMAIKKRSSRTRRIRPVSTRPSVGDEPSPSPTPSAPPHSDPHTHSASWECLSTLPTNG
SPLRHVTHVRPRPPRRHRAGHPPPESHGSENGGASTMEDGLPDFYSKRVLPDSQLSSLHQ
GQSLRRKKRRSMLSIFSGFRKNRNSTISNQDPDPSENVYSMIQHPKDAGRPDSAVPGANG
TMSSPRPMQGVLVHGLRASSPPCVIQRQSTDLVSMVYSCIGAEIEDSDGSSSCDIKDTEQ
DTDRSTIVSDVPPDTHTNGHVASSREQEGVRQERIVPLTDPRSDVEEDREGSQARPEPPP
QSCKPSVAVMRQRHLQESLEEAGRLQVEEDQSERKHEEKQRGRGPEGQRPLMPTKLSLDI
LRDTSSPEKAVRSPKSSPISPDEELTNEQRSLPPAQPIIEEDGTSPPASANPGREAADPA
SQDEDEGRNGFPAAPRHTRKSNSFDIGMDSDSPYDLERSSDRRFPVKKPSFPQYRNSSLD
FPAGTRCYESPQLGNRDSL
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaaaggacacagccacgggcttcgtgaacgtcagcagggagatcacagagggc
atcaggaaggtgctggacaagcaggccattaagtttgtgcgagccatcaagcaggacacc
cggagcggcaagacagaggacaggattctggtcctggcatcatggagactgtatctcttc
gctgtcaaggtgcccaccaagacggaggtcaccttcaacttcctggaaatccgagccatg
aacacctatccggagcaccaggttgtcatcgatacagacaagaccacctactcgctgaag
ctccagaaccaggagcagctgaaccacgtggtcagccacatcaactactccctctcccga
gtcttcaacaactccatttacgcccctccaatctgtcgagcagaaggagacgtgaccgat
ggaagtatcaagttttcagccaactccgaatcgtcattggatccccagaaatcatgcgga
ggtttttcggagacctacgcggccctttgtgactacaacggaatcggctgcaaagaagaa
gtgcagtgggatgtcgacaccatctaccactctcaggacaacagggagttcaacctagtg
gatttcagccacctcgacagcagggacttggcggtaatcgtggcatccattgcgtacaac
acctggttcaccaagctgcactgcaaagacatgcgcatagggtccgaggtggtggaccag
gttctgcacacagtcagcaagtccaacactctggaggagctcactctggagaatgcagga
ctgaaatcggactttccgcagaagatggcgtcggcgctgtctgaaaacccggcctctgtg
atccactccctgaacctggcccacaacacgctggacaaccagggagtctccaacctgatt
caacaagtgtgtcgcctcaacaagggtctgcgcctcctcaacctctccaagacctccctt
tcctccaagggtgtggttactttgtcccaggcgttgtgttcaagtgacgactactccaat
tctctactgcatctggacctcagtaaaaaccccggggttctgtctggagaggacgcaaca
aacttgtacctgttcctggcccagcccaactgcctggtccacctggacctctctgggaca
gactgcaccgtggactcgttgtttggggccttgctgcgaggctgttgcgctgacctctcc
tacctgaacctctccaagaactccttctctcacaggaaagcgagagattctctgccaact
ttccgccagttcttcagctccgcattcagcctgacccatgtcagcctggcctcggtgaaa
gtccctcctgatatgctgagggctctgtttctaggtctgtccaataaccctcatatcact
gacttacacctggacatcagcagctgtgagttaaggtcagcaggtgctgccgttatacag
gagctgtttccgcgagttgcgtgcgtggggactttagacatctctgataatggtttagat
gccgacttgctggctgtcatcccagcgttctccagacacccgtccctcaaacacctgatg
ctggggaagaacttcaacatcaagggcagggtgctggaggaaattctgcagaaactggtt
catttggtgcaagaggaagagtgtgccctgcactccctctccctggccgactcgaggctc
cgtcagcggggcacagtgatggtcaacgccctgggctccaatgcctgcctacggaaggtc
gacctgagcggaaaccagctggaggactccggggccaagatgctcagcaaagccctgcag
ataaacacaacgctcaggagtgtgacgtgggatcgcaacaacaccacagcaatgggcttc
caagacgtggcgagggcgctggagcacaatttcactcttcagtacatgcccctccccctc
agtgatgtcactcaggcgcaccgcagcaacccggagaagacggaccaggccctgaccaag
atccaacgtgctctgcttaggaacaaccagactcagcacttctcccagaagcaggcgctc
aggctgcaccagggcctcgtcaccagcacggcagaacaggtgatggagcgtctgtgtgtg
cgggtgcagcagcaggtgggtgtcctgaaaggttctgaggagggagaggaggtccagacg
gccagacaaatcctgaaggaagccagggactccagagctctgtatccctctctgtgtgag
ttggcccatgtgttgtcagtggacggccccgtcaaacagcgtctggacactctggctgga
gaactggccaaagccgcggacaaggagttgcaggtggtggtggactccatggtgttgctg
tgccgcgagctgtgtccaatgtcctgctccgccgcagagagactcaacccgcccctctcg
tccatctcagagcaagtttccatccctcgtgccgccatccgcagcgccctgatggagcga
gcggcggaggatatcaacagagctttagaggaggtgaagttgtctgtggtctcctatctg
accaactccatagtggatcagattctacaagagctgtacacaacccataaaaccctgctg
cggcaggtgtctcaggcgaagcgctgggatgacgtcgggacgggccggcgcaccgtcaga
cagtccaggatagctgagtccctggagtttcccgatgaggactttggtgtcaacctggga
atagacacaatggctataaagaagcggagctccagaactagaagaatccgtcccgtctcc
accagacccagtgttggtgatgagcccagtccctctcccaccccctctgctccaccgcac
tccgaccctcatacacactcggcatcatgggagtgtctttccaccctccccacaaatggc
tcgcccttgcgtcacgtgacccacgtcaggccccgcccaccacggagacacagagcgggg
caccctcctcctgaatctcacggctcagagaacggaggagccagtacgatggaggacgga
ctgcctgacttctacagcaagagagttctacctgacagtcagctgtcgtccctccatcag
ggccagtcgctgaggagaaagaaaagacgcagcatgttgtcaattttctccggcttccgc
aagaaccgcaactccaccatctccaatcaggacccggacccctcagagaacgtctactcg
atgattcagcaccctaaggatgctgggaggccagacagcgcggtcccaggagcaaacggg
accatgtcttcacctcggcccatgcagggggtccttgtgcacgggctgagagcctccagc
cccccctgcgtcatccaaagacagtccacagacctggtcagcatggtgtacagctgcatc
ggggcggagatcgaggactctgatggcagcagctcctgcgacatcaaagacacggagcag
gatactgacaggtccaccatcgtctccgacgtgccccccgacacccacaccaatggccac
gtggcgtcctccagggagcaggagggggtccggcaggagaggatcgtccccctcacagac
cctcggagcgacgtggaggaggacagagaggggagccaggccaggcccgagcccccccca
cagagctgcaagccctctgtggctgtcatgaggcagagacacctgcaggagagcctagaa
gaggcaggaaggctgcaagtagaagaggatcagagtgaacgaaaacatgaagagaagcag
agaggaagaggaccagaaggccagcgtcctctcatgcccaccaagctgagcctcgacatc
ctaagagatacgagctctccagaaaaagctgtgcgttctcccaaaagctcgcccatcagc
ccagatgaagagctgaccaatgagcagaggagcctccctccagctcagccaatcattgaa
gaagatgggaccagccccccagcgtctgccaatccggggagagaagcagcggatcctgcc
agccaagatgaagatgaaggccgtaatggattccccgcagcaccgcgtcacaccaggaag
tccaactcgttcgacataggcatggactcggacagcccctacgatctggagaggtcctca
gatcgcagattccctgtgaaaaagcccagtttcccccagtacagaaacagctctctggac
ttcccagcggggaccaggtgttacgagagcccccagctgggcaacagagactcgttatga
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