Pseudochaenichthys georgianus (South Georgia icefish): 117461773
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Entry
117461773 CDS
T09629
Name
(RefSeq) dynein, cytoplasmic 1, intermediate chain 2a-like isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04145
Phagosome
pgeo04814
Motor proteins
pgeo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117461773
09142 Cell motility
04814 Motor proteins
117461773
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117461773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117461773
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pgeo04812
]
117461773
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
117461773
Cytoskeleton proteins [BR:
pgeo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
117461773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
Dynein_IC2
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_EIPR1
EIF3I
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Beta-prop_IP5PC_F
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
117461773
NCBI-ProteinID:
XP_033959583
LinkDB
All DBs
Position
17:20011550..20019689
Genome browser
AA seq
645 aa
AA seq
DB search
MSDKSELKAELERKKQRIAQIREEKKRKEEEKKRKDGESKRGGEAGGHDDSDLERKRREA
EMLLQSVGITPDISHAQPLRVVTEDTCLFHYLVPAPMSPSNKSVGSDAGSQDSGDGNAGP
RTLHWDPDPSTLQLHSDSELMGRGAVRLGMSKLTQVDFAPKEMVSYCKETQTATEALTHS
DQKADEEEDEEMTAPPTADDAQEEKDDGEGQEDDGPKELTEEEKLQVLHCEDFLAFFERG
SRIVERALAEHVDVCFDYSGRDLEDKEGDLQAGAKLVLNRQFADERWTKNRVVTCLDWSP
QYPELLVASYNNNEDSPHEPDGVALVWNLKYKKETPEYIFHCQSEVMSAGFAKFHPNLVV
GGTYSGQIVLWDNRSNKRTPVQRTPLSAAAHTHPVYCVNVVGTQNANNLISISTDGKMCS
WSLDMLSQPQDSLELVFKQSKAVAVTSMAFPLGDVNNFVVGSEDGSVYTACRHGSKAGIT
EVFEGHHGPVTGLSCHSAGGPVDFSHLFISSSFDWTVKLWSTKSTRPLYSFEDSCDYVYD
AMWSPTHPALFACVDLAGRLDLWNLNNDTEVPTASVYVEGAPALNRVRWAPSGKEIATGD
SDGQVQVYDVGEQICVPKADEWTRFVRTLAEINENRDEAEELANA
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaagagtgagctgaaggctgagctggagaggaagaagcagcggatcgcccaa
attcgagaggagaagaagagaaaagaagaggagaagaaaaggaaggatggcgaatcgaag
cgtggaggggaggcgggcggccatgacgactctgacctggagaggaagaggagggaggcg
gagatgctgctgcagagcgtcggcatcaccccggacatttcccacgctcagcccctgagg
gtagtaacagaggatacgtgtctgtttcactacctagtccccgcccccatgtctccctcc
aacaaatcagtgggcagcgatgcaggaagccaggattctggggatggaaacgcaggacca
aggacattgcattgggatcctgacccctctactctgcaactgcactccgactctgagctc
atgggacgtggagctgtgaggctgggcatgtccaaactgacccaggtggactttgcaccg
aaggaaatggtgtcgtactgcaaagaaacacagacagccactgaggcactgacacactct
gatcaaaaagcagatgaggaagaggatgaggagatgactgctcctcctacagcagatgat
gcccaggaggagaaagatgacggtgaagggcaggaggacgacggtcccaaagagctgacg
gaggaagaaaagctgcaggtcctgcactgtgaagacttcctggcgttcttcgagcggggc
agcaggattgtggagagagctctggctgagcacgtggacgtctgcttcgactacagcggc
agagatctagaggataaggagggtgacttgcaggcaggggctaagctggttctgaacagg
cagtttgcagatgagcgctggactaaaaacagagtggtcacctgtctggactggtcccct
cagtatccagagctgctggtggcctcgtataacaacaacgaggattccccccatgagcct
gatggagtggctctggtctggaacttgaagtacaagaaggaaacaccagagtacatcttt
cactgccagtcagaggtgatgtcagccggtttcgcaaagttccaccccaacctggtggtg
ggtgggacgtactccggacagattgtcttatgggacaacaggagcaacaagcgcaccccc
gttcagagaactcccctgtctgcagctgcacacacacacccagtctactgtgtgaatgtg
gtcggaacccaaaacgctaacaacctgatcagcatttccactgacggaaaaatgtgctcc
tggagcctggacatgctctcccagccacaggacagcctggagctggttttcaaacagagc
aaagcggtggccgttacctccatggcgttccctctgggagacgtgaacaactttgtggtg
gggagcgaggatggctcggtgtacacagcctgtcgccacgggagtaaggcgggtattact
gaggtgtttgagggccatcatggtccggtaaccggtctgagctgccacagcgccggaggg
cccgtcgacttctctcatctcttcatctcctcctcttttgactggaccgtcaaactctgg
agcaccaagagtacccgtccgttgtactcgtttgaggacagttgtgactatgtctatgat
gccatgtggtctccaacacacccggctctgttcgcctgtgtggacctggctggacgtctg
gacctgtggaacctcaacaatgacacagaagttcccaccgccagtgtgtatgtggagggg
gctccagccctgaaccgtgtgaggtgggctccctctggcaaagagatcgccaccggggac
tctgacggacaggtgcaggtgtacgacgtaggggagcaaatctgcgtgcctaaggctgat
gagtggacgcgcttcgtcaggacgctggctgagatcaacgagaaccgagatgaggctgag
gaactggccaacgcctga
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