Pseudochaenichthys georgianus (South Georgia icefish): 117461823
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Entry
117461823 CDS
T09629
Symbol
mex3b
Name
(RefSeq) RNA-binding protein MEX3B
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117461823 (mex3b)
04121 Ubiquitin system [BR:
pgeo04121
]
117461823 (mex3b)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117461823 (mex3b)
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
117461823 (mex3b)
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117461823 (mex3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
zf-RING_2
KH-I_KHDC4-BBP
zf-C3HC4
RING_XB3-XBAT31
KH_2
zf-C3HC4_2
KH_DEAH11_2nd
Prok-RING_4
zf-RING_UBOX
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
117461823
NCBI-ProteinID:
XP_033959682
LinkDB
All DBs
Position
3:4717531..4722426
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AA seq
533 aa
AA seq
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MPSSLFADSGVQGDALDDQRALQIALDQLSLLGLDNDDNPLYDNQELRKKSVNMTECVPV
PSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRREDVAMARREIISAAE
HFSMIRASRNKNTSPTGTGTPVPGPPNLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQQ
THTYIVTPSRDKEPVFEVTGMPENVDRAREEIEAHIAMRTGGLIEVQDENDFHANGTDVG
FDLHGHPTAWSKPGAGVTPSSVRKPFSNYRNDSSSSLGSASTDSYYNSSRMADYSPPSPA
LSYTTTNNNNGNNNNNNINTNGNGFVYGSDVISPDCTDLTFDSSSGFDSAPTPPGLLWSQ
YESRRTPSSPGGSSSTSAIFPVNSSNANGIVVSQRRVNGCTPQPRLSPPLHSLSGGHGEH
PLARRVRSDPGGGPLTFPGYSNTVATLPGPHLPGVSCDSSASSTSSSSSTSSGTSRKGSR
DCSVCFESEVIAALVPCGHNLFCMECANRICERNEPQCPVCHAGVTQAIRIFS
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgcccagctcgctgttcgcagacagcggcgtccagggggatgcactggacgaccagaga
gccctgcagatcgccctggatcagctctccctgctcggcttggacaacgacgacaacccg
ctgtacgacaaccaggagctccggaagaagagcgtcaacatgaccgaatgcgtcccggtt
cccagctccgagcatgtggctgagattgttggcagacagggttgcaagatcaaagcgctg
cgagccaagaccaacacctacataaagacccccgtgcgaggggaggagcccgtgtttgtg
gtgacgggccggagggaggatgtggccatggccaggagggagatcatctcagccgcggag
cacttctccatgatccgagcctccaggaacaaaaacaccagccccaccgggactgggacc
ccagtgccaggaccgccgaacctgcccggacagaccaccatccaggtgcgggtgccttac
cgtgtggtggggctcgttgtaggtcccaaaggggccaccatcaagcgcatccagcagcag
acccacacctacatcgtgacccccagccgggacaaagagccggtgttcgaggtgacgggg
atgccggagaacgtggaccgagcccgggaggagatcgaagcacacatcgccatgaggact
ggaggcctcatcgaggtgcaggatgaaaatgacttccacgccaacggtacagatgtaggt
ttcgatctgcacgggcaccccaccgcgtggtccaagccgggcgccggggtgaccccctcc
tcggtgcgtaagcccttctccaactaccgcaacgactcgtcctcctccctgggcagcgcc
tccacagactcctactacaacagctcccgaatggccgactacagcccccccagccctgcc
ctcagctacaccaccaccaacaacaacaacgggaacaacaataacaacaacatcaacact
aacggcaacggctttgtttacgggagcgacgtgatctcgccggactgcactgatctgact
tttgactcgtcttcagggtttgactctgcgcccacccccccaggcctcctgtggtcccag
tacgagagccgcaggaccccctcctcccctggaggcagctcctccacctcagccatattc
cccgtcaactcctctaatgccaatgggatcgtggtgagtcagaggagggttaacggttgc
accccccagcccagactctccccccccctccatagcctcagcgggggccacggtgagcac
ccgttagccaggagggtgcgcagtgaccccggcgggggccctctcactttccctggttat
tccaatactgtggccaccctgccgggcccccacctgcccggggtctcctgcgactcctcg
gcctcctccacctcctcctcctcctccacctcctctggcaccagccggaaaggcagccgc
gactgctcggtgtgcttcgagagcgaggtcatcgccgccctggtcccctgtgggcacaac
ctcttctgtatggaatgtgccaatcgtatctgtgagaggaacgagccacaatgccccgtc
tgccacgccggcgtcactcaggctatacgtatattttcatag
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