Pseudochaenichthys georgianus (South Georgia icefish): 117461876
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Entry
117461876 CDS
T09629
Name
(RefSeq) excitatory amino acid transporter 3-like isoform X1
KO
K05612
solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter), member 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117461876
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgeo02000
]
117461876
Transporters [BR:
pgeo02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
117461876
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GFIT
Motif
Pfam:
SDF
Motif
Other DBs
NCBI-GeneID:
117461876
NCBI-ProteinID:
XP_071062365
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Position
17:6130114..6141181
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AA seq
419 aa
AA seq
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MSLSIGIFLVMMFEPGSSPSVEGEDPEDIEPFFNIDSLMDIIRNMAPKCLIQASFRQYET
DRLEYEIESDEFNSSVDTNMTEIRLLVKYVDGTNILGLIVWALIFRIIFNRIGKDGKVLV
DVFQALNEATKIIVDMILSFLPVGVLFLTTSYVIEYDNVTTIFQIGKFMALVIIGHIIHS
TIVLPLTYFLCTRCNPYDVIKEVVPALKKALVSSSSVNTLPLTAQCCESRLMIHKSVTQY
MLPIGTNINMDGTALYEVAAAIFITQINHIHLKIGQLIAITLTSGVCSIGSSGIPATGGM
TTMFVLMAVGLPAKEATILVIAEWLLDRCNSVVNVLGNCIGVAIVHEVSKGQLGEMDQGP
STPRSSMMRNSAWIRSWLSSAQRSTARTRKTCSALWNIRRAKMTTTLEKVHKNPIKLLS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgtccatcgggatatttctggtgatgatgttcgaaccagggtcttctccttct
gttgaaggagaagacccagaagacattgagcccttcttcaatattgactccttgatggac
atcataaggaacatggcgcctaaatgcctgattcaggctagcttcagacagtacgagact
gataggttggaatatgaaattgaatcggatgagttcaattctagcgtggatacgaatatg
acggaaatacgactgttggtcaaatatgtcgatggaaccaacattttgggcctgattgtg
tgggctttaatattccgcataatcttcaacaggattggaaaagatgggaaagtccttgta
gatgtctttcaagccctcaacgaggccacaaaaataattgtcgacatgatactgagcttc
ttgccagttggagtgctgttcttgaccacaagctatgttattgagtatgataacgtgaca
actatctttcaaattggaaagttcatggcactggttattattgggcacataattcactca
acaatagttttgcctctgacctatttcctgtgtacgagatgtaacccctatgacgtcatc
aaggaggttgttcccgctttaaagaaggcactggtcagctcgtcaagcgtgaacacacta
ccactcactgctcaatgttgtgagagccgactcatgatccacaaaagtgtcactcagtac
atgctgcccatcgggaccaacatcaacatggatggaactgccctctatgaggtggccgca
gccatcttcattacccagatcaaccacatccacctgaagatcggccagttaatcgctatt
acgttgacatcaggagtgtgcagcataggatcctcagggatcccggctactggaggaatg
accacgatgtttgttctgatggccgttggtttacctgccaaggaagccaccattctggtg
attgcagaatggctcctagaccgctgcaacagtgttgtcaacgtcttgggaaactgtatt
ggcgtggcaatcgttcacgaggtgtcaaaaggacaactgggagaaatggaccaaggaccg
tcaacgccaagatcgtcgatgatgaggaactcagcctggatcaggtcctggctgagttca
gcccagaggagcactgccaggacgaggaagacatgttcagcgctctggaatatcaggagg
gctaagatgacaactacacttgagaaagttcacaaaaatcccattaagttgttgtcatga
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