Pseudochaenichthys georgianus (South Georgia icefish): 117461976
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Entry
117461976 CDS
T09629
Symbol
snap47
Name
(RefSeq) synaptosomal-associated protein 47
KO
K18212
synaptosomal-associated protein 47
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117461976 (snap47)
Membrane trafficking [BR:
pgeo04131
]
SNARE
SNAP-25 (Qb,c)
SNAP-47
117461976 (snap47)
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Gene cluster
GFIT
Motif
Pfam:
EIN3_DNA-bd
V-SNARE_C
Vps36_ESCRT-II
ORF239-like
Motif
Other DBs
NCBI-GeneID:
117461976
NCBI-ProteinID:
XP_033959863
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Position
17:complement(28403949..28411143)
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AA seq
423 aa
AA seq
DB search
MSRDAPIHSWPGSYYINTEKRWETGTLSLTRTMVRFVSNQSKESLTSFRLSRIMDIKMES
SSFIFSTLTVLEEGNVKHWFGSLKPNRVVVYNVLEHFWRERLLSPGSEARGAECKPSKGS
ELISLVAGAQRRLEDTGKVLSHQGEQFGNAMQGLEKIDSDLGVADKLLSELESPPWWPFG
KLPWKTQQEAKAEDAARAAARSAAGKGSGKNKVIASIPAIVTKGGDSDLKPGCLLVLVSS
LEVLDTNCQLIHRFERNDIDEVRVHSPYEITVRQRFIGKPDICYRFLSAKMPEAMSVLEI
QYRKKVEFTSEYTAFRATPVSSPCDTEGQTWNEGLLQRCQDTELPLEVPAGALSQLQVHV
LQPSVSQSEAQELKQMLMQLKSLALEAETELERQDDVLNDLTSSTDRATMNVEKHTCRMK
KLL
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgagccgggatgctcctatccacagctggcctggctcctattacatcaacactgagaaa
cggtgggaaactggcaccctgtccctcaccaggaccatggtgcgctttgtctctaaccag
agtaaggagagtcttaccagctttcgcctttccaggatcatggatatcaagatggagtca
tccagtttcatcttcagtactctcacagtgcttgaagagggcaatgtgaaacactggttt
ggttcccttaaacctaacagggtggtggtttataacgtgttagagcatttttggagggaa
cgcctcctgtcccctggctcagaggcacggggggccgaatgcaaaccctctaaaggcagt
gagctgatcagcctggtggcgggggcccagagaagattggaggacaccggcaaagtcctc
agccaccaaggagagcagtttggcaatgcgatgcagggactggagaagattgactcagat
ctgggcgtggctgataaacttttgtcagagctggaatctcccccctggtggccttttggt
aaactcccctggaaaactcagcaggaagctaaggcggaggacgctgcaagagctgcggcc
cgttcagcagctggtaaaggctctggtaaaaataaggtaatcgcaagcatcccagctata
gtgaccaaaggaggggactcagacttaaaacctggatgcttgttggtgctggtgtcctca
ctggaggtgctagacacaaactgccaactcattcaccgctttgaaagaaatgacattgac
gaagttagagtgcacagtccgtatgagatcactgtaagacagcggttcattgggaagccg
gatatatgctacaggttcctgtctgccaagatgccggaggcaatgtcggtgttagagatt
caataccgaaaaaaagtggagttcactagtgaatacactgctttcagagcaactccagtt
tcatctccgtgtgacacagaggggcaaacctggaatgaaggtctgctacagaggtgccaa
gacacggagctcccactagaggtcccagcaggagcgctgtcccagctgcaggtgcacgtc
ctccagccatctgtcagtcagtctgaggcccaggaactgaaacagatgctgatgcagctg
aagagccttgccctggaggcagagacagagctggagcggcaggatgatgttctgaacgac
ctgaccagctccactgaccgagccaccatgaacgtggagaagcacacttgccgcatgaaa
aaactgctgtag
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