Pseudochaenichthys georgianus (South Georgia icefish): 117462008
Help
Entry
117462008 CDS
T09629
Name
(RefSeq) receptor-type tyrosine-protein phosphatase S-like isoform X2
KO
K06778
receptor-type tyrosine-protein phosphatase S [EC:
3.1.3.48
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117462008
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pgeo01009
]
117462008
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pgeo04515
]
117462008
Enzymes [BR:
pgeo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
117462008
Protein phosphatases and associated proteins [BR:
pgeo01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
117462008
Cell adhesion molecules [BR:
pgeo04515
]
Immunoglobulin superfamily
Type II RPTP family
117462008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_2
Ig_DSCAM-DSCAML_C
ig
Pur_ac_phosph_N
Tc-R-P
PTP-SAK
DSPc
V-set
Tissue_fac
Y_phosphatase3
PTPlike_phytase
Fn3_PTPRU
PTP-NADK
Ig_VEGFR-1-like_5th
Fn3_VIN3
MpPF26
Motif
Other DBs
NCBI-GeneID:
117462008
NCBI-ProteinID:
XP_033959923
LinkDB
All DBs
Position
17:20677238..20750192
Genome browser
AA seq
1527 aa
AA seq
DB search
MPLSRTGGALARCRRPILGLRSSPSPLGLLLPFIILLTGPLSSLCGEPASPKFTKMPTDQ
IGVSGGVASFVCQASGSPKPVVYWNKKGKKVNSQRIETVEFDEGAGAVLRIQPLRAPRDE
NIYECVARNSEREVSVTAKLAIIREDLLPFGFPSIDMGPQLKVVERTRTATMLCAASGIP
DPEISWFKDFLPVDPFSSQGRIKQLRSGALQIENSEETDQGKYECVATNSQGVRYSSPAN
LYVRGATDTLRRVPPRFSILPSNHEIMPGGSVNITCVAVGSPMPYVKWMLGTEDLTTEDE
MPIGRNVLELNGVRESANYTCVAMSSLGIIEAIAQVLVKTLPKPPGTPIVTETTATSVTI
TWDSGNPDPVSYYIIQYRAKGPDSKYETVDSITTTRYSIGGLYPNTEYEIRVSAFNSIGQ
GPSSTRVDARTGEQAPASPPRNVQAHIMSRNTVMVRWEEPEEPNGQVKGYRVYYTMDPSR
PMNEWQIHNVQDSVITTIQNLVTSETYTIQVLAFTSVGDGPFSDPVHVKVMPGVPGQPGK
FKVNKVADTHIELTWEPAYTKEGIVNYELLYRPVKFGSLEKLTFGPRSSYTVEGLKANTE
YSFSLAAISNKGIGAFTNELVQRTLQANVPRNFSVNLATKTSILLTWEFPESSNPYRFTV
EYNRQKMEVDARLKKAVIPNLQPDTSYDFKITAPEGNMGGLRHRISAKTSPPITIRRPEI
DHTRDTETTVTIILPSLENRSPVKNVYVVVVPLRRARGVIRHLKSPDEMDLEELLKDISQ
KQKDSRQQKQVDLRRAYITARFTPATLPAFFTLGDQLDYGGFENRALEAGQEYVFFILAE
LNSTTGKMYVASPYTDPVIAPDSDPQPLDAGDGLIWVVGPVLAVVFIICIVIAILLYKNK
PDSKRKNSEPGTKRLLENEDGTRIAHHPTDPVEMRRINFQTPGMMSHPTIPINELAEHIE
VLKANDNLRLSQEYESIDPSQQFTWEHSNLEVNKPKNRYANVIAYDHTRVILAPLEGILG
SDYINANYIDGYRKQNAYIATQGPLAETFGDFWRKVWEQRAASVVMMTRLEEKSRIKCDQ
YWPSRGTETYGTIQVTLLDTMELATFCVRTLSLHKSGSSERREVRQFQFTSWPDHGVPEY
PTPFLNFLRRVKACNPPDAGPIIAHCSAGVGRTGCFIVIDAMLERIRQERTVDIYGQVTL
MRSQRNYMVQTEDQYSFIHEALLEAVACGNTEVAARSLYSYMQKLAKVEPGEHITGMELE
FKRLANTKAHTSRFVTANLPCNKFKNRLVNIMPYETTRVCLQPIRGLEGSDYINASYIDG
YRQQRGYIATQGPLAETTEDFWRMLWEHNSTIVVMLTKLREMGRVGEKCHQYWPAERSAR
YQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTVRQFQFTDWPEQGVPKSGEGFIDFIG
QVHKTKEQFGQDGPISVHCSAGVGRTGVFITLSIVLERMRYEGAVDIFQTVKMLRTQRPA
MVQTEDEYQFCYQAALEYLGSFDHYAT
NT seq
4584 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgtccaggacaggtggagctcttgcccgatgcaggaggcctatcctggggctc
cgctctagcccctctcccctgggtctgctgctgcctttcattatcctgctaactggccct
ttgagcagtttgtgtggagaaccagcttccccaaagttcaccaagatgcccacagaccag
atcggcgtgtcagggggtgtggcatcatttgtgtgccaggccagtggcagtccaaagcct
gttgtctactggaacaagaagggcaagaaggtcaactcccagcgtatcgagactgtagag
tttgatgagggagccggtgctgtgctgaggatccagcctctcagagcacctcgagacgag
aacatctacgagtgtgtggcacgcaacagtgaacgggaggtgtctgtcactgcaaagctg
gccattattagagaggacctgttgccattcggcttccccagtatagacatgggtccccag
ctgaaggtggtggagcggacgcggacggccaccatgctgtgcgctgccagcggcatcccc
gacccggagatctcctggttcaaagacttcctgcccgtggaccccttcagcagccagggt
cgcatcaaacagctccgatcaggagcgctacagatcgagaacagcgaggaaacggaccaa
gggaagtacgagtgtgtggccaccaactctcagggcgtgcgctactcgtccccggccaac
ctttatgtgcgaggagcgacagacacattgcgccgtgtgccccctcgtttctccatcctc
ccctccaaccatgagatcatgccaggagggagcgtcaacatcacctgtgtggccgtgggt
tcgcccatgccctacgtcaagtggatgctgggcaccgaggacctgaccacggaggacgag
atgcccatcggacgcaacgtgctggagctcaacggagtccgagagtctgcaaactacacc
tgtgtggccatgagcagcctgggtatcatcgaggccatcgctcaggtcttagtgaagact
ttgccaaagcctcctggtacccccatagtcacagagaccaccgccaccagtgtgaccatc
acctgggactctggaaacccagaccccgtctcctactacatcatccagtaccgagccaag
gggccagacagcaagtacgagacggtggacagcatcaccaccacccgctacagcatcggg
gggctctaccccaacactgagtatgaaatcagagtgtcggccttcaatagcatcggccag
ggcccctcctctactcgtgtggatgcccgcacaggggagcaggccccggccagcccgccc
cgaaacgtccaggcacacattatgtctcggaacactgtgatggtccgctgggaggagccg
gaggaacccaatggacaggtgaaaggctatcgtgtgtactacaccatggacccgtcccgg
cctatgaatgagtggcagatccataacgtccaggacagcgtgatcaccaccatccagaac
ctggtgacctctgagacgtacaccatccaggtcctcgccttcacctctgtaggagacgga
cccttctcagatcccgtccatgttaaagttatgcctggagtcccaggccaaccggggaag
tttaaagtcaataaggtggccgacacacatattgagctgacctgggaacctgcctacaca
aaggagggcatcgtcaactatgaactgctctacagacctgtcaagtttggcagcttggag
aagctgacattcgggccgaggagttcgtacacagtggagggtctgaaagccaacacagag
tactccttctccctggccgccatctcaaacaaaggcatcggagctttcaccaacgagctg
gtgcagaggacattacaagccaatgtgccgaggaatttttccgtcaatctggccactaag
accagtattctgctgacctgggagtttccagagagcagcaacccctatcgctttacggtg
gagtataacagacagaagatggaggtggacgctcgtctgaaaaaggctgtcatcccaaac
cttcagcctgacacgagctacgactttaagattacggctccggagggaaacatgggcggc
cttcgccatcgcatctccgccaagacttccccaccaattactatccgccgccctgaaatt
gaccacacccgtgacacagagaccaccgtcaccataatcctgccgtcgctggagaatcgt
tctcccgtcaagaacgtgtatgttgtcgtggttccactgaggagagcccgcggcgtcatc
agacacctcaagagtccagatgaaatggacctagaggagctgttaaaagacatcagtcaa
aagcagaaagattctcggcagcagaagcaggtggacctgcggcgggcttacataacggcc
cgtttcacacctgccacgctgccggccttcttcaccctgggggaccagctggactatggg
ggctttgagaaccgagctctggaggcggggcaggagtacgtcttcttcatcctggccgag
ctcaactccacaacggggaaaatgtatgtggcgagtccctacacagaccctgtgattgcc
ccagattcagacccccagcccctcgatgcaggcgacggtctgatctgggtggttggaccc
gtcctggctgtggtcttcatcatctgcattgtcattgctatcctcctttacaaaaacaaa
cctgacagcaagcgcaagaactctgaacccggtaccaagagacttttggagaacgaagat
ggaacgaggatagcccatcacccgacagaccccgtggagatgagacgcatcaacttccag
actccaggaatgatgagccaccccaccatccccatcaacgagctggccgagcacattgag
gtgctgaaagccaacgacaacctgcgcctctcccaggagtacgagtccatcgaccctagt
cagcagttcacctgggagcattcaaacctggaggtcaacaagcccaaaaatcgctacgct
aacgtcatagcgtacgaccacaccagagtaatcctggctcccctagaaggtatcctgggg
agcgactacatcaacgccaactacattgatggctacaggaagcagaatgcctacatcgct
acacaggggccactggcggagacgttcggggacttttggaggaaggtgtgggagcagcgg
gccgcctctgtggtcatgatgacgcgcctcgaggagaagtcacggataaagtgtgaccag
tactggccgagtcgtggcacagagacgtacgggacgatccaggtcaccctgctggacaca
atggagctggccacattctgtgtgcgcaccctttccctgcacaagagtggcagcagtgag
cggcgagaggtgcgtcagttccagtttacatcctggccagatcacggtgtgccggagtat
cccacccccttcctcaacttcctccgcagggtcaaagcctgcaaccctcctgacgccgga
cctattatcgctcactgcagtgccggcgttggtcggactggctgttttattgtcatcgat
gccatgctggagcgcattcgacaagagcgcactgtggacatctacggtcaagtgaccctg
atgcgctcacagaggaactacatggtgcagacggaggatcaatacagtttcatccacgag
gccctcctggaggccgtggcctgtgggaacactgaggtggccgcgaggagtctttactcc
tatatgcagaagctggccaaggtggagcccggagagcacatcaccggcatggagctggag
ttcaagcggctggctaacaccaaagcccacacatcccggttcgtcacagccaacctgcct
tgcaacaaatttaagaaccgacttgtcaacatcatgccctatgaaaccacccgcgtctgc
ctccagccaatcagaggcctggagggctctgactacatcaacgcgagctacatagacgga
tacaggcagcagagaggctacattgccacccagggtccgttggctgagactacagaggat
ttctggaggatgctgtgggaacacaattccaccattgtggtcatgctcaccaaactgaga
gaaatgggccgggtaggggagaagtgtcaccagtactggcctgcagagcgctcagcccgg
taccagtacttcgtggtggaccccatggctgagtacaacatgcctcagtacatcctccgg
gagttcaaagtcacggatgccagggacggccaatcacggacagtgcgtcagttccagttc
accgactggccagagcaaggcgtgcccaaatccggagagggcttcatcgattttattggc
caagtgcacaaaaccaaggagcagtttggccaggatggaccaatcagcgttcactgcagt
gctggcgtggggcggaccggtgtcttcatcactctgagtatcgtcctggagaggatgcgt
tacgaaggggcagtggacatcttccagaccgtcaaaatgctgcgcacacagagaccggcc
atggtgcagactgaggatgagtatcagttctgctaccaggctgctctggaatacctgggt
agcttcgaccactatgcaacgtaa
DBGET
integrated database retrieval system
