Pseudochaenichthys georgianus (South Georgia icefish): 117462049
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Entry
117462049 CDS
T09629
Symbol
pif1
Name
(RefSeq) ATP-dependent DNA helicase PIF1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgeo03032
]
117462049 (pif1)
03029 Mitochondrial biogenesis [BR:
pgeo03029
]
117462049 (pif1)
Enzymes [BR:
pgeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
117462049 (pif1)
DNA replication proteins [BR:
pgeo03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
117462049 (pif1)
Mitochondrial biogenesis [BR:
pgeo03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
117462049 (pif1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
PH_LRR1
Pif1_2B_dom
AAA_30
AAA_19
AAA_22
Herpes_Helicase
UvrD_C_2
Mg_chelatase
DEAD
AAA_7
RsgA_GTPase
ABC_tran
AAA_16
AAA_5
PhoH
Motif
Other DBs
NCBI-GeneID:
117462049
NCBI-ProteinID:
XP_033960000
LinkDB
All DBs
Position
17:complement(18711812..18729409)
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AA seq
633 aa
AA seq
DB search
MLSGEDGAQLQCCLTVEQLNSSGETTRRQVIRKASILLGRNEFQEIIIRVHDGKLCQNYP
LKDFKLFTKFARDGKCTVKMVPENTQLLFSNCPPDRLNLFLKTLSIKHQARLRSKPLTDR
EKLKAGLPRSFEAISPLQQKDIQRVNDLRSKEPPKGLAARTNSTAVAGSGKQVKRSRSDT
NFSPVKANPSKKPILALPSRKLNKDQSAVLTAVLSGKNVFFTGSAGTGKSFLLKRIMGSL
PPKSTFATASTGVAACHIGGTTLHNFAGIGSGSAPLEQCIELAQRPGVLQHWTSCRHLII
DEVSMVEAQFFDKLESVARSVRRSTAPFGGIQLIICGDFLQLPPISKGKEKASFCFQARS
WHKVIQVNMELMEVRRQTDQSFISLLQKVRVGRVTEEVTAKLMESAYHCIEKDGILATRL
CTHKDDVELTNDNKLQQLPGSARVFEALDSDPALVKTIDAHSPVSRLIQLKVGAQVMLTK
NLDVARGLVNGARGVVVAFENGKHGLPHVHFLCGVTEVLKLERWVFKSGGGLHLSRQQLP
LKLAWAISIHKSQGMTLDCVEISLARVFESGQAYVALSRARSLEGLRVMDFDPRVVRADP
DVLVFYKRLRKERILMQASMDDFIGNSNQENPW
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgttatccggggaggacggtgcccagctgcagtgctgtctgaccgtggagcagctgaac
tcctccggagagaccacccggaggcaggtcattcgcaaagcctctattcttctgggcagg
aatgagttccaggagataatcattcgggtccacgacggaaaattatgtcaaaattaccct
ctgaaagacttcaaactttttacaaaattcgccagagatgggaagtgcacggttaaaatg
gtccccgagaacacacagctgctcttctccaactgcccccctgaccggctgaacctcttc
ctcaaaacgctgagcatcaaacaccaggcccggctgaggagcaagcctctgaccgaccga
gagaagctcaaagccggcctgccccgcagcttcgaggccatcagccccctgcagcagaag
gacatccagagggtgaacgatctgaggagcaaagagcctcccaaaggactggcagcccgc
accaatagcaccgctgtggcagggtcagggaagcaggtcaaaaggtcgaggagtgacact
aacttcagcccagtaaaggccaacccgagcaagaagcccattctggctctcccatcacgt
aaactgaataaagaccagtccgctgtcctcactgctgtgctgagtgggaagaatgtcttc
ttcactggaagtgcaggtacaggaaaatccttcttactaaagagaatcatgggatcactt
cctccaaagagcacatttgccacagccagcacaggagtggcggcgtgtcacatcggagga
acaacgttacacaacttcgctgggattggctccggctcggcccctctggagcagtgcatc
gagctggcccagaggccgggggtgctgcagcactggacctcctgtcggcacctcatcatc
gacgaggtctccatggtggaggcccagttctttgataagctcgagtctgtggcaaggtcg
gtgaggaggtcgaccgcgccgtttggaggcatccagctgatcatctgtggcgacttcctg
cagctgcctcctatttccaagggaaaggaaaaggccagcttctgcttccaggccaggagt
tggcataaggtgatccaggtcaacatggagctgatggaggtacggaggcaaactgaccag
tcattcatctccctcctgcagaaagtgagagtgggcagggtgacggaggaagtcactgct
aagctgatggaaagcgcctaccattgcatcgagaaggacggcattctggcgaccaggctg
tgcacgcacaaggatgacgtggagctcacaaacgacaacaaactccagcagctgccaggt
tcagcgcgtgtgtttgaggcgctggacagcgaccccgccctggtgaagacgatcgatgct
cacagccctgtcagcagactgatccagctcaaagtgggagcgcaggtcatgctgacaaag
aacctggatgtcgctcgaggtctggtgaacggagcgcggggcgttgtggtggcctttgag
aatggaaaacatggactcccacatgtgcatttcctgtgtggcgtcactgaggtgctaaag
cttgagcgctgggtgtttaagtcgggtggagggctccacctgagccgacagcagctgcca
ctcaaactggcctgggccatctccatccacaagagccagggaatgacactcgactgtgtg
gagatttctctggcacgcgtctttgagagtggccaggcttacgttgccttgtcccgggct
cggagcctggagggtctgcgggtgatggacttcgacccccgtgtggtcagggcggatcca
gatgttctcgtcttctacaagagactgaggaaagagaggatcctcatgcaggcctctatg
gacgattttattggcaacagcaaccaagaaaacccttggtga
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