Pseudochaenichthys georgianus (South Georgia icefish): 117462096
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Entry
117462096 CDS
T09629
Symbol
exosc4
Name
(RefSeq) exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117462096 (exosc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117462096 (exosc4)
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
117462096 (exosc4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
117462096 (exosc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
117462096
NCBI-ProteinID:
XP_033960054
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Position
17:complement(27153955..27155882)
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AA seq
245 aa
AA seq
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MAGLELLSDQGYRLDGRKATELRKFQARMGVFAQADGSAYLEQGNTKALAVVYGPHEVRG
ARSRIRHDRAVINCQYSMATFSTAERKRRPHGDRKSTEMSLHLKQTFEAAVMTQLYPRSQ
IDIYVKILQSDGGNYSVCVNAATLAVIDAGIPMRDYVCACTVGFVDETPLADLCYAEEGG
GVSSLALALLPRGGQIALLQMDARLHQDHLEALMEAAMTACKGVSKVLDQVVRQHLQEAS
VPSAE
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtctggagctgctgtcggaccagggataccgtttagatggaagaaaagccacc
gagctgcggaagtttcaggcccgcatgggtgtgttcgctcaggcggacggctcggcgtat
ttagagcagggaaacaccaaggctctggctgtggtgtacgggccgcatgaagtacgaggt
gcacgcagccggattcgtcatgatcgagctgttatcaactgtcagtacagcatggccacc
ttcagcacggcggagcggaagaggagaccccacggggaccgcaagtccactgagatgagc
ctccacctcaagcagacgtttgaagccgctgtgatgacccagctctacccacgctcccaa
atagatatctatgtcaagattctgcagtcagatggcgggaactacagcgtgtgcgtgaat
gctgcaactctggcggtgattgacgcaggcatccccatgagggactatgtgtgtgcctgc
accgtcgggttcgtggatgagacgcccctcgctgacctttgctatgcagaggaaggtgga
ggagtgagctctctggccttagcactgctgccccgggggggacagatcgctctactgcag
atggatgccagactacatcaggatcacttggaggctctgatggaagctgccatgacagct
tgtaaaggtgtgagcaaggtgctggatcaggtggtgcggcaacatctccaagaagcttct
gtgccttctgcagagtga
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