Pseudochaenichthys georgianus (South Georgia icefish): 117462099
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Entry
117462099 CDS
T09629
Symbol
rpap2
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase rpap2 isoform X1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pgeo01009
]
117462099 (rpap2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgeo03021
]
117462099 (rpap2)
Enzymes [BR:
pgeo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
117462099 (rpap2)
Protein phosphatases and associated proteins [BR:
pgeo01009
]
HAD phosphatases
Fcp/Scp phosphatases
117462099 (rpap2)
Transcription machinery [BR:
pgeo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
117462099 (rpap2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
117462099
NCBI-ProteinID:
XP_033960057
LinkDB
All DBs
Position
17:complement(7060377..7086484)
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AA seq
678 aa
AA seq
DB search
MIKARTADLSVRLAVEGTTSYVRVQAVANRNNMETGERRRSEGSAKTTKNGRTGVRTMAA
AEEEARRRELVKGKLRQQYDLEKRSLKIVERLLEDNVTEDFLVDCAKFITPTNYKDVIEE
RFIAKMCAYPICSIKLGKIPTQRYQISTKTNKVYDITERKCYCSNFCYKASKEFELQIST
SPLWLRPHETPPEIKLMKKGDGGSSGEEVSLKVQRLTEEDIENAAPPEESLSSEQGPADG
LLHSESSDTEQEQDFVSSVVSQRQGPRVHWGDLPKRTDEEHKEDEEKERRKKREGKIKRK
SRTEVETDGKKQPSSLRTDTPHVEQAPDEVAAVEDAIVKLNLYNLSETHAAPPPVHSTTK
ARHTNLFASLPCEDSNSSTEGKHLPFSTLINSNQDDTASNIQPGLNITQVGMSKRGAAGL
RDLFKNHAAAAQPDSIRLNQLESLRRTLKEWGTEETLKFLHGADHSHSATFHGVKEVEED
KEEELDEDDLEDEDDDGGQERPSAAAPDYQALRQETQQAEIRVREFYKGSRTLPEKKEEQ
QGNEQGVDEDEDKRYPTLPLVDSQAQHLIQKRIAVEKLSSCLRNIVGSLRLTMSDVSSAL
NNLVKTFRFTNKNIIHKTPEWTLIAVILLHLLSGVSRVVQEALLTDASEVYLNTLMEELG
LQRQDLLDLVQLFQAPAH
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgattaaagcgcgaacggctgatttgtccgttaggcttgccgtagaaggaactacgtca
tatgttagagttcaagctgtagcaaacaggaacaacatggagacgggggagaggagaagg
agcgaaggctctgctaaaactactaaaaatgggcggacaggcgtcagaacaatggctgct
gctgaagaagaagcaagaaggagagagttggtgaagggcaagttaaggcagcagtatgat
ctggagaagagatccctgaagatagtggagcgtctcctggaggacaacgtgacggaagac
ttcctggttgactgtgcaaagttcataactcctactaattacaaagatgtcatagaggag
aggttcatcgctaaaatgtgtgcttatccaatatgttcgattaaactgggcaagatccca
actcaaaggtatcaaatatcgacaaagaccaataaggtgtacgacatcacagagcgcaag
tgttattgcagtaacttctgctacaaagcctccaaagagtttgagctccagatatccact
tcacctctgtggctcaggccgcatgagactcctccagaaattaaattgatgaagaaagga
gatggcgggagttctggtgaggaggtgagtctgaaggtacagcgtctgacagaggaagac
attgaaaatgctgctccccccgaggagtccctcagctctgagcagggtcctgcagacggc
ctcctccacagtgagagcagcgacaccgaacaggagcaggactttgtctccagcgtggtg
tcccagaggcagggacccagggtgcactggggcgacctgcctaaacgcacagatgaagag
cacaaagaagatgaagagaaggagaggagaaagaaacgggaggggaaaataaaacggaaa
tcacgaacagaagttgaaactgatggtaaaaaacagccgtcatctttacgcacagacaca
cctcatgtagagcaggcaccagatgaagtagccgctgtggaagacgctatagttaagctg
aatttatacaacttatctgagactcacgctgctcctccacctgttcactcaacaacaaaa
gcacgacacacaaatctttttgcttctctaccttgtgaagactcaaacagctcaacagaa
ggcaaacacctccccttttccaccctgatcaacagtaatcaggatgatacagcatcgaac
atccagccaggcctcaacatcacccaggtggggatgagcaagagaggtgctgccgggctt
cgagacctctttaaaaaccacgctgctgctgcccaacccgactccatcaggctcaaccag
ctggagagcctgaggagaacgctgaaggagtggggcaccgaggagacgctgaagttcctg
cacggcgctgaccactcacacagtgcaactttccatggtgtaaaagaagtagaagaggat
aaagaggaggagctggacgaagacgaccttgaggatgaggatgatgatggggggcaggag
agaccgtctgctgcagctccagactaccaggcgctgaggcaggagacccagcaggcggag
atcagagtcagggagttctataaaggcagccggactctacctgagaagaaggaggagcag
caaggaaacgagcagggggtggacgaggacgaggacaaaaggtatcccactctgccgctc
gtcgactctcaggctcagcacctcatccagaaacggatcgcagtggagaagctcagcagc
tgcctcagaaacatcgttggttctctgcggctcaccatgagtgacgtctccagcgccctc
aacaacctggtcaagaccttcaggttcaccaacaaaaacatcatccacaaaactccagag
tggaccctcatagccgtcatacttctccatctgttgtcgggggtgtctcgggtggtgcag
gaggccctgctgacggacgcatcagaggtgtacctgaacacactgatggaggagctcggt
ctgcagaggcaggacctgctggacctagtgcagctgtttcaagcccccgcacactga
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