Pseudochaenichthys georgianus (South Georgia icefish): 117462173
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Entry
117462173 CDS
T09629
Name
(RefSeq) desmoglein-2-like protein
KO
K07597
desmoglein 2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117462173
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pgeo04515
]
117462173
Cell adhesion molecules [BR:
pgeo04515
]
Cadherins
Major cadherins
117462173
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Motif
Other DBs
NCBI-GeneID:
117462173
NCBI-ProteinID:
XP_033960154
LinkDB
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Position
17:26422120..26431664
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AA seq
1104 aa
AA seq
DB search
MAILLKCSICILLVFFLTLVPVSAEGKGQELRRHKREWIIAPRQLKENHDYTGLQSIARI
RSDKENHTRIMYYLSGPGVDQPPVGVFGVDRNTGYVKIFSILDREETPFFHLKGVAKYAD
GTLAENDIDLKITVLDENDCPPIIKVQQVGYVNESSAIGTVVMKVIATDADQKNTIHSRI
FYSIVEQSSSAGMFFINSQTGEVMVRQNSLDRERQDTYTLTIQATDMNGQAGGNIGSEQI
SVTILDINDNIPTLEKESYEGSVQENKVNMEVMRVKALDMDLINTANWEAMYTIISGNEA
GYFSITTDSKTNEGIIMINKALDYEEIKSLNLEVAVSNKAAYSFGSGSATGAGSGSVVSK
SYPVKINVVNEKEGPRFQPSVKVVTLSEDQTSVSINTIIGNYAAIDSDTLQTATNVRYAK
IKDDDNWLIIDEKTADIRLNKLPDRESTFLINGTYYAKIICITDDNPSKTATGTIAIQVE
DFNDHCPTLIATTQTMCLEDKVIYVTAVDQDEFPNSAPFEFTVIGGSSDWKWTVESLNAT
TCILRDHANLWPGSYKVAVEVKDQQGKSCADVEMVDVDVCSCGDKTKTCRERILKAVDFG
APGILLMLLGLLLLLLLPLLLLFCLCGGAAAIGDFKAIPYDTKQQLISYHTEGQGEDKEV
PLLLAPLDHGGSHVNMKDINNFSDNMYISRETGGGGFGAGHTLTSENMQKNMYNRYNNGM
DYVDGGMMTGQEHSFSRYGAGAAAGAGAFDGMALSNQYLEEYYSSKYNHAVQQSKGKDAL
LVYNYEGQGSLAGSVGCCSLLENDDDLAFLNDLGPKFKTLAEVCHGSTFVSKSVDAGVYV
SPPRPVSPVWPSPSTHTHVSTHSETIRDRDHVNISTLNTSNVASESSTFVQEERVTDIAQ
GSASVPTVHVQDKIMIPSQTMLIQQPTMYYAATPMYVVESNPQMVLVTGGTHGAVGQVGQ
VGLGQGLMQVGGLQGSQGMVLVDRQVGMGGMAGQVVQGISQGTLSRSGQMLVVENASSGG
VQGAHIAQGFLQTGHGSAGQGLELRGQGVQFQTERFSSNSRSSTGSNEETALKATPKTKG
SQKVVVQRKKISVTERNIESNIRA
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggctatactgctgaaatgcagcatttgtattctgctggtgttcttcctgactcttgtt
cctgtgtcagccgaaggaaaggggcaggaattacgcagacacaaaagagaatggatcata
gctcccaggcagttgaaggagaaccatgattacaccggcctgcagagtattgctagaatt
cgatccgataaggagaaccacacaaggataatgtattacctatcagggcctggagttgac
cagccacctgttggcgtatttggtgtggaccgtaacactggctatgtgaaaatcttttct
attctggaccgagaggagacacccttttttcatttgaaaggtgtggcgaaatacgctgac
gggaccttagctgaaaatgatattgaccttaaaattactgttttggatgaaaatgactgc
ccaccgatcatcaaagtacaacaagttggatatgtcaatgaatcgagcgcaataggtact
gttgtgatgaaagtaattgctacggatgctgatcagaagaacacaatccactccaggatt
ttctacagtattgtggagcagagcagctcagctgggatgttcttcatcaactctcagact
ggagaggtcatggttcgacagaacagtctggatagggagagacaagatacatatacattg
actatacaagctacagacatgaatggacaagctggaggaaacattggaagtgaacaaatt
tcggtcacaattctggacataaatgacaatattccaacccttgaaaaagaatcgtatgaa
gggagtgtgcaggagaacaaggtcaatatggaagtgatgagggtgaaagcccttgacatg
gatctgattaacactgcaaactgggaagctatgtacacaataatttcagggaatgaggcc
ggctatttcagtatcactactgattccaagaccaatgaaggaattatcatgatcaataag
gctttggactatgaggagattaagtcgcttaacttggaagttgctgtttccaacaaagca
gcgtacagttttggcagtggttctgcgacaggggctgggtctggatctgtagtctcaaaa
tcctaccccgttaaaatcaatgtggtcaatgagaaggaaggcccccgattccaaccaagt
gtcaaagtggtgactctctctgaggaccaaacttccgtctccatcaacacaatcatcgga
aactatgctgctattgatagtgataccctacagacagccaccaatgtaaggtatgctaaa
atcaaagatgatgacaactggttgattattgatgaaaagacagcagatatccggctgaat
aaactgcctgaccgagagtccactttcttgatcaatgggacatattatgccaaaattata
tgcatcaccgatgataatccctcaaaaacagctacggggaccatagcaattcaggtggag
gactttaatgatcattgtccaacactgatcgctacaacgcaaacaatgtgcctcgaggat
aaagtgatctacgtcacggccgtagaccaagacgaattccccaattctgccccatttgag
ttcactgtgattggggggagtagtgactggaaatggactgtggagagtcttaatgcaacg
acatgcattctgcgagaccatgccaacttgtggcctggctcttacaaagtggcagtggag
gtcaaagaccagcagggaaagtcctgtgctgatgtggagatggtggatgtagatgtgtgc
agttgcggagacaaaaccaaaacctgtagggagcgtattctaaaggcagtcgattttgga
gctcccggtatcctgcttatgctcctgggcctgctgctcctgttgttgctgcccctgttg
ctgctgttctgcctgtgcggaggtgcagcagctattggagatttcaaggctataccatat
gatacaaaacaacagctcatctcatatcacactgagggacaaggagaagacaaggaagtt
ccgcttctgcttgcgccattggatcatggtggaagccatgtgaatatgaaggacatcaac
aactttagtgataacatgtacatatctagggagactggtggaggaggtttcggcgctggt
cacaccttgacatctgagaacatgcagaagaacatgtacaaccgttataataacggaatg
gactacgttgatggtgggatgatgacgggacaagaacatagtttctctcgttacggggct
ggggctgcggctggggccggggcctttgatgggatggctctgtccaaccaatacctggag
gagtattattcaagtaaatacaaccatgctgtacaacaatccaaggggaaggacgctctg
ctggtctataactatgagggtcaggggtccctggcgggttctgtaggttgctgcagcctt
cttgagaatgacgatgaccttgcgttcctcaatgaccttgggcctaaatttaaaaccctg
gctgaggtttgtcatgggtcaacctttgtgagcaagtcagtggatgcaggggtttatgtc
tctccacccagaccagtttctcctgtctggccctccccctccacccacacacatgtaagc
actcactcagaaacaatcagggacagggaccacgtcaacatcagcactctcaacacctct
aatgtagcatctgaatcctccacttttgtgcaggaggagcgagtcactgacatagcccag
ggttcagcatctgttcccactgtacatgtccaagacaagataatgattcccagtcagacg
atgctcatacagcagcccactatgtactatgccgccacgcccatgtatgtagttgagtcc
aatccccaaatggtgcttgtgacagggggaacccacggggcagtgggtcaagtaggacaa
gttgggttaggtcaggggctgatgcaagttggtggtctacaaggctctcagggtatggtc
cttgtggatagacaagtaggaatgggtggaatggcagggcaagtagtacaaggcatttca
caaggaactctctccagatccggacaaatgttggtggtggagaatgcgtcctcaggtgga
gtgcaaggagcacacatagcccagggctttcttcagacaggacatgggtctgcagggcag
ggtttggagctcagagggcaaggtgtgcagtttcaaactgagagattttcttcaaattct
cgcagctctacagggtccaatgaggagactgctctgaaagccacacccaaaacaaaggga
agccagaaagtggttgtgcaacgtaagaagatctcagtcactgagagaaatattgaatcg
aatataagagcttaa
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