Pseudochaenichthys georgianus (South Georgia icefish): 117462176
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Entry
117462176 CDS
T09629
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E-like isoform X1
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04010
MAPK signaling pathway
pgeo04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117462176
04020 Calcium signaling pathway
117462176
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pgeo04040
]
117462176
Ion channels [BR:
pgeo04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117462176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
DUF2755
NOA36
Motif
Other DBs
NCBI-GeneID:
117462176
NCBI-ProteinID:
XP_071062423
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All DBs
Position
17:complement(27382392..27425044)
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AA seq
2120 aa
AA seq
DB search
MILATITANCVVLALEQHLPGDDKTPMAKRLEKTEPYFIGIFCFEAGIKLLALGFVFHKG
SYLRNGWNVMDFIVVLSGIMATAGAHMNIPVDLRTLRAVRVLRPLKLVSGIPSLQIVLKS
IMKAMIPLLQIGLLLFFAILMFAIIGLEFYSGKLNQNCLPSVEHLENQTVDSSELAFACG
VRKCPEGYDCSDTWIGPNDGITQFDNILFAVLTVFQCITMEGWTAVLYNTNDALGTTWNW
MYFIPLIIIGSFFVLNLVLGVLSGEFAKERERVENRRAFMKLRRQQQAERELNGYRAWID
RAEEVMLAEENKSSGRSPLDVLKRASKKTGARRGAPGDEKYTDMSTANMSRSRMNFRSGR
RGPAAYLRRKERMLRISIRRMVKTDTFYLMVLSLVALNTICVAIVHHNQPDWLTIFLYYA
EFVFLGLFLAEMFLKMYGLGFRLYFHSSFNCFDCGVIVGSIFEVVWGFFRPGMSFGISVL
RALRLLRIFKITKYWASLRNLVVSLMSSMKSIISLLFLLFLFIVVFALLGMQLFGGRFIF
EDYTPTNFDTFPASIMTVFQILTGEDWNEVMYNGIRSQGGVRYGMWSSIYFIVLTLFGNY
TLLNVFLAIAVDNLANAQELTKDEEEEEEFFNQRYARGRDGLISDGRRRPYLYRKRAIHR
GRPNFPEEPEDRPEPPEEQQPLKGPNAFVSRRERRRKVHMSVWEQRANQLRKRRQAASRE
ELFAGATEDTEETPAVPLPAPEATPGQLPESVGMPIPESPMSVTIAIPEPPASEPLANLS
EEKTGGGNHRAAGGGRHRMARKFRTSQGGEDGARHRRHRHRDARPEAKSLDCTVSPHEVP
LVKRSHSQEGVLDEKEERDDREGAERAEEVEGSVQEDGGTCIINPYAEVGDECQGETADP
PQCEQLLERPWSEQGDGEHTDQTLPVEPALEATEFSVRTIESESRQVSIKRAKSDPAESV
AIEMSAQPLLELRPMTANSKELEAYNSEQTDKENDTEDDEEEDDDDEDDEDEEEEMEEPQ
TPPKPVAPDSMFIFKASNPIRRICHYMVSLRYFEMTILLVIVASSIALAAEDPVCTNSDR
NKVLRYFDYVFTGVFTFEMIIKMIDQGLILHDGSYFRDMWNILDFIVVVGALIAFALTNN
KGRDIKTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYQLFMFIFAVI
AVQLFKGKFFYCNDSSMNSEKECQGYYIDYSRDKKEMKRREWKRHEFHYDNVCWALLTLF
TVSTGEGWPQILQHSTDVTEDSMGPSRGNRMEMSVFYVVYFVVFPFFFVNIFVALIIITF
QEQGDKMIQECSLEKNERACIDFAISAKPMTRYMPQNRQTFQYRLWHFVASPSFEYTVLV
MIALNTVVLMMKHHSAPTAYDMVLKHLNTAFTVLFSLECILKIMAFGLVNYFRDTWNIFD
FITVLGSISEIIVDLQSLNTINMSFLKLFRAARLIKLLRQGYTIRILLWTFVQSFKALPY
VCLLIAMLFFIYAIIGMQVFGNIKLNDESHINQHNNFKTFFGALMLLFRSATGESWQEIM
LSCLSGRECEPDSSIPPLMTSPDHVGGCGTDFAYCYFVSFIFFSSFLMLNLFVAVIMDNF
EYLTRDSSILGPHHLDEFVRIWGEYDRLACGRIHYTAMYETLIHMSPPLGLGKKCPAKIA
YKRLVLMNMPVDEDMSVHFTSTLMSLIRTALDIKIARGGEDRIALDSELQKEVSIIWPYL
PQKNLDLLVPINKDTDMTVGKIYASMMIMDYFKLNKAKKLRQQLEAQKSSLIFKRLDAST
LPEDILSNTQTLPIMAHSAGSALTRGGLLALSPISPEELFLQPIGSDTESQQQDLTEVAG
GSMKRSVSTVADQRVNGLWEEEQSPARLYRPRHKSYKAAVSRSEHWHQGDRERGRSKERC
HLLSDASRGNSEERRLQASRSSSGERAHPKDKQGNSSDSPVPSTSESSTPTGRRPAAKSS
RPHISYSPLHPSVGKDGDEQRSPVAKRRGKAKRGTQERVLDDRRGEEEQDPSPLRRYPSE
PFLASQEGEHSPDPSGPMETLTFEAAMACSLGRSNTVSSGHPRLRTGWQVPNGHFRKRLA
QTTSAAGCDPLSDTEEDDRC
NT seq
6363 nt
NT seq
+upstream
nt +downstream
nt
atgatcctggccaccatcaccgctaactgtgttgtgctggccctggagcagcacctccct
ggagacgataagacccccatggcaaagagactggagaagacagagccgtacttcatcggg
atcttctgtttcgaggcggggatcaagctgctggcccttggtttcgttttccataaaggc
tcgtacctgaggaacggctggaacgtcatggacttcatagtcgtgctcagcgggattatg
gccactgctggagcccacatgaacatccccgttgaccttcggaccctgagggcggtgcga
gtgctgagacctcttaaactcgtctcggggatacccagcctgcagattgttctgaagtcc
atcatgaaggccatgatcccgctgctacagatcggcctgctcttgttcttcgccatcctc
atgttcgccatcattggtctggagttttacagtgggaagcttaaccaaaactgcctgcca
tctgtcgaacatcttgaaaatcagacggttgactcgtcagagttggcgttcgcctgcgga
gtgaggaagtgtccggagggctacgactgcagcgacacctggatcggacccaacgacggc
atcacacagttcgacaacatcctgttcgctgtgctcaccgtcttccagtgtatcaccatg
gagggatggacggccgttctctataataccaacgatgctttgggtaccacatggaactgg
atgtacttcatccctctcatcatcattggctcattcttcgtgctgaacctggttttggga
gtcctgtccggagagtttgccaaggagagggagagggtggagaacaggcgggccttcatg
aagcttcgccgccagcagcaggcggaaagagaactgaacggctacagagcctggatagac
agggcagaggaggttatgctggcggaggagaataaaagttctgggagatcgccgttagat
gtgctaaagagagcgagtaagaagactggtgcacggagaggagcgccaggggacgagaag
tatacagacatgtctactgccaacatgtctcgatccaggatgaacttccgcagcggccgg
cgaggcccagcagcctacctgcggcgtaaagagcgcatgttacgcatctccatccgccgc
atggtgaagacggacactttctacctgatggtgctcagtcttgtggctctcaacaccatc
tgtgtggccatcgtccaccacaaccagcccgactggctgaccatcttcctctactatgca
gagtttgtttttctggggctgtttttggctgagatgtttttaaaaatgtatggtctgggt
ttccggctctacttccattcatctttcaactgctttgactgtggggtcattgttggcagc
atctttgaggtagtttggggtttcttcaggcccggcatgtcctttgggatcagcgtactg
agggcgctgagactcctgagaatattcaaaataaccaaatactgggcgtctctcaggaac
ctggtcgtgtcccttatgagctccatgaagtccatcatcagcctgctgtttctcctcttt
ctgttcatcgtggtgtttgctctgctggggatgcagctttttggaggaaggttcatcttt
gaagattacactcccaccaactttgacacgtttccagcttccatcatgacagtgtttcag
attctgactggtgaggactggaacgaggtgatgtataacgggattcgctcgcagggtgga
gtgcggtacggcatgtggtcatcaatctacttcatagtgctcaccctgtttggaaactac
acactactgaatgtcttcttggccatcgctgtggataatctggccaacgcccaggaactg
acaaaggatgaagaggaggaggaggagttcttcaaccagagatacgccagaggcagagat
ggcctgatatctgatgggaggagaagaccctacctatacaggaaacgagccatccaccga
ggcagacctaacttcccagaggagcccgaggacaggccggagcccccagaagaacagcag
cccctcaagggccccaatgccttcgtcagccgccgcgagaggaggaggaaagtccacatg
tcggtgtgggagcagagagccaatcagctgcggaaacgtcgccaggcggctagcagagag
gagctttttgcaggcgctactgaggacacagaggagactcccgccgtccccctccccgcc
cccgaggccaccccgggtcaactgcccgagtctgtggggatgcccatcccagaatccccg
atgtccgtcaccatcgccatccccgagcctccggcgtcagagcctctggctaacctgagc
gaggagaaaacaggaggaggtaaccaccgggcagcaggcgggggccggcacaggatggcc
cggaagttcagaaccagtcaggggggggaggacggggcccggcacaggaggcaccgtcac
cgcgacgctcgccctgaagccaagagtctggactgcaccgtgtcgcctcacgaggtgccg
ctggtcaaacggtcccacagccaggagggggtcctggacgagaaggaggagagggacgac
agagagggagcagagagagcagaggaagtggaagggtccgtccaagaggatgggggaaca
tgcatcatcaacccatacgcagaagttggagacgagtgtcaaggagaaactgctgaccct
ccccagtgtgagcagctgctggagcgtccctggtcagagcagggtgacggagagcacaca
gaccaaaccctcccagtggagcccgccctagaggccacagagttcagtgtgaggaccatc
gagtctgagagccgccaggtctccatcaagcgtgccaaatccgacccggcggaaagcgtg
gccatcgaaatgtctgcacaaccgctgctggagctcaggcccatgacagcgaacagcaaa
gagttggaggcgtacaattctgaacagacagacaaagagaacgataccgaggatgatgag
gaagaggacgacgacgacgaggatgatgaggatgaggaggaggagatggaggaacctcag
actcctcccaaacctgtagctccagacagcatgttcatcttcaaggcctccaaccccatc
aggaggatctgtcactatatggtctctttgcgctactttgagatgaccatcctcctggtg
atcgtggcgagcagcatagcactggctgctgaggaccctgtgtgcaccaactccgacaga
aacaaggtccttcgttatttcgactacgtgttcactggagtgttcacctttgaaatgatc
atcaagatgatagaccagggtctcattctgcacgatggctcttatttccgagatatgtgg
aacatcctggatttcatcgtggtggtgggagctctgattgcttttgctttaacaaacaac
aaaggcagagacatcaagacaatcaagtctctccgagtgttgagagttctgcgacctctt
aaaaccatcaagaggcttcctaaactcaaggctgttttcgactgtgtggtcacatctctg
aagaacgtcttcaacatcctcatcgtgtatcagctcttcatgttcatcttcgccgtgatc
gccgtgcagctcttcaaggggaagttcttctactgcaacgacagctccatgaattcagag
aaggaatgccaaggctactacatcgactacagccgagacaaaaaggagatgaagagaaga
gagtggaagagacacgagtttcactacgacaacgtctgctgggccctcctcacactcttc
actgtctcaactggagagggatggcctcagatcctgcagcactccaccgatgtgacagag
gatagcatggggccgagtcgggggaaccgcatggagatgtctgttttctacgtggtttac
tttgtggtcttcccgttcttcttcgtcaacatctttgtggctctgatcatcatcaccttc
caggagcagggggataagatgattcaagagtgcagtctggagaagaacgagagggcttgc
atagactttgccatcagcgccaagccgatgacccgctacatgccgcagaacagacaaacc
ttccagtacagactgtggcactttgtcgcgtcgccctccttcgagtacaccgtgctcgtc
atgatcgcgctcaacactgtggtgctcatgatgaagcaccactcggccccgacagcctac
gacatggtcctaaagcacctcaacacggccttcactgtcctcttctctttggagtgtata
ctcaagatcatggcatttggtttggtgaactactttcgagatacttggaatatttttgat
ttcatcactgttcttggcagcatcagtgagataattgtggatttacagtcgttgaacacc
atcaacatgagtttcttgaagctattccgagcagccaggttgatcaagctgctgagacag
ggttacaccatccgcattctgctgtggaccttcgtacagtctttcaaggctcttccttat
gtctgccttctcattgcgatgcttttcttcatatacgccatcattggaatgcaggtgttt
ggaaacatcaagctgaacgatgagagtcacatcaatcaacacaacaattttaagaccttt
ttcggtgcactgatgctgcttttcaggagtgccacgggggagtcctggcaggagatcatg
ctttcgtgtctgtcgggtcgggagtgtgagccggactcctccatcccccccctcatgacg
tctccggaccacgtgggggggtgtgggacggactttgcttactgctactttgtctcattc
atcttcttcagctcatttctgatgctgaatctgtttgtggctgtgatcatggataacttt
gagtacctgacgcgagactcctctatcctgggtccacatcacctcgatgagtttgttcgc
atctggggggagtacgatcgcctggcgtgcggtcgtatccactacactgccatgtatgag
acgttaatacacatgtcaccgcccctgggcctgggaaagaaatgtcctgctaagatcgcc
tacaagaggttggtgttgatgaacatgcctgtggacgaggacatgagcgtccacttcacc
tccaccctgatgtcgctcatccgcacagctttggacatcaagatagcgagaggcggtgag
gaccgcatcgctctggacagtgaactgcagaaagaggtcagcatcatttggccttatcta
ccgcagaagaacctggaccttctggtaccgatcaacaaagatacggacatgacggtgggg
aagatctacgcctccatgatgataatggactacttcaaactgaacaaagccaagaagctc
aggcagcaactcgaggctcagaagagtagcctaatcttcaagcgcctggatgcctccacg
cttcctgaagacattctgtccaacacccagacgctgccgataatggcccacagcgctggc
tccgctctgaccagaggaggcttgttggctctgagccccatctcacctgaggagctgttt
ctgcagcccatcggctctgacactgagagtcaacagcaggatctgacggaggttgcaggt
ggctccatgaagcgttcagtgtccactgttgccgatcagcgggtgaacggtctttgggag
gaagagcaaagtcctgccagactttatcgacctcgacacaagagctacaaagctgctgtt
tctcggtctgagcactggcatcagggcgacagggagcgcggccggtctaaggagcgctgt
cacctcctgtcggatgcgtctcgtggaaactctgaggaaagaagattgcaggcctcacgg
tcctctagtggagagagagcacaccccaaagataaacagggcaacagctcggacagtccg
gtgccctcaacctcagagtccagcacccccaccggccgacgccccgccgcaaagagctct
cgtccgcacatctcctactccccgctgcacccctctgtcgggaaggacggggatgagcag
cgcagcccagtggctaagaggcggggcaaagccaaacggggcacccaagagagggtccta
gacgacaggcgaggcgaagaagaacaagacccgtccccacttcgccgctacccctcagag
ccgttcctggcctcccaggagggcgagcacagcccggacccctccggacccatggagacg
ttgaccttcgaggcggccatggcctgcagcctgggacgctcaaacacagtcagctcgggc
catccccgcttgcggaccggctggcaggtccccaacggacactttcgaaagcgtttggca
caaacaacctctgctgcaggctgtgaccctctcagtgacacggaggaggacgacaggtgc
tag
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