Pseudochaenichthys georgianus (South Georgia icefish): 117462208
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Entry
117462208 CDS
T09629
Symbol
gigyf2
Name
(RefSeq) GRB10-interacting GYF protein 2 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117462208 (gigyf2)
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117462208 (gigyf2)
Surveillance factors
Other surveillance factors
117462208 (gigyf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
117462208
NCBI-ProteinID:
XP_033960219
LinkDB
All DBs
Position
17:complement(25250508..25270377)
Genome browser
AA seq
1363 aa
AA seq
DB search
MSCDLHSAILWKARERERESATQLAYKPCAVRTSRELRGRMAETQTLNFGPEWLRALSGG
GSSGIGGGGGGCGVVSPPLSPALPKYKLAEYRYGREEMLALYVEDDKIPLDLHDKEFLPI
LQEEPLPPLALVSFTEEEQRNFSMSVNSSAVLRLTGRGSGPIVGAPRGRSTSRGRGRGRG
DGGFYQRSFDDVEGFGRGAREMHRSQSWEERGERRFEKPGRKEPVEVVPGHFPMIPVRVN
YEDGVTGLPRKQDFTRSESENWRSAQNAEGPRSAGWRELPDQRRRFPFDAREDERGYRRP
RSGSGSLDDDSLPEWCLEDADEEAGTFDSSGAFLSLKKASKEPILEEGELDFKPLEECEE
GLEEDDCQLKGTKDIETDAERKEYSRASEEALPAAPPVSEPQSRSLIQPNRTEESERPIE
RQPPLELPPENCKAPLHVPMSNSMREPMNHISTTLAEVSAPSPIVQLSQKHMVVPAAMKH
PLSFSSSLMAPIGRPTAVSHDTDEDERLKHFEQEAEKMVAYLQDSVVDDDRLTVKTSEKP
KPVGLPLTNEAALKWFYKDPQGEIQGPFSNPEMTEWFQAGYFTMSLLVKRGCDEVFQALG
DIIKIWGRVPFTPGPAPPPLQAEGDQERLKRQQELTALNLYQLQQLQYQYLLRQQYAQAL
AQQKTLNSAPLQQQQQHQQQINLLLQQYQTLKLRASESPLPPVTRSPSVPDTGSVWEMQN
SSSQASCTPNVQQAAPNTGVMHHVVSHSTAWDGSSVWDLPIDSVAQAPTIEQMQQLEKSK
SAKLELERRDAEMRAKREEEERKRLEEALRARQEEERKCLAEEELARHKQEEALRREREQ
DEAQRRQKEEEERMAQEEALRRLEERRREEEERRKREEFLRKQEDERRKQEELEALRRRE
EEKRAEDEAAAAAAVLAQQQLEEQKRREQEAQRQQEQQRQRQQQQEALRRLQQQQQQQQL
AQMKLPSSSKWGQQSSVSAVNQNQSALSLAEIQKLEEERERQTREEQRRQQQEMLKLQQQ
QALHLAQQPQAKMSSWGSVATQPAATKSLLEIQREEAQQMKQRQEQPPPQQQQQQQQQQP
QQQPQPQPVVPQQSRSQNKTTSSLSSSVWGSMNTSPSTNWGSDSSSIWGDTNNSNLGFWD
EAVKEAVQQPPPTKKASTQKNNKGNANLSNSVSGRVNKKAEEEEEKLVKLFKGVNKSHQD
TFMQWCEQTLHTLNTANNLDVPTFASFLKEVDSPYEVHDYVRAYLGDTPEAKDFAKQFIE
RRAKQNANQQKPAPQNQQQALKQQQQQQQQQQQQQQDSVWGGSSSVYQSNHTSAQQQRFE
TVTSGKKKKKQKMVRADPSLLGFSVNASSERLNMGEIETLEDF
NT seq
4092 nt
NT seq
+upstream
nt +downstream
nt
atgtcatgtgacctacactcagccatcttgtggaaagcgagagagagagagagagagagc
gccacacaactcgcatacaaaccttgtgctgtcagaacaagcagagaacttcgaggaaga
atggccgaaacccagacacttaactttggaccagaatggctccgtgccttgtctggaggt
gggagcagcggtattggtggtggaggaggcggctgtggggttgtctctccacccctctca
cctgcattgccaaagtataaactcgcagaatatcgctacggaagagaagaaatgttagca
ctttatgtagaggatgacaagatccccttagaccttcacgataaagagttcctgcccata
ttgcaagaggagcccttaccgcccctggcactcgtgtcttttacagaggaggaacagaga
aatttttccatgtctgtaaacagttcagctgtactccggctgacagggcgtggaagcggt
ccgatagtaggggcaccaagaggccgaagtacctcaaggggtagaggccgcggaagagga
gatggagggttttaccaaagaagttttgatgatgtggaaggttttggtcgtggagcgagg
gagatgcatcgctcccaaagctgggaagaaagaggagaaagaaggtttgaaaaaccaggt
cgaaaagaaccagttgaagttgttccaggacattttccgatgattcccgtccgagtcaac
tatgaagacggtgtaaccggcctaccgaggaagcaagacttcacacgatcagagagtgag
aactggcgttctgctcagaatgcggaagggcctcggtcggcagggtggcgggaactccca
gatcagcgtcgtcgtttcccattcgatgccagagaagacgagcgcggctacaggaggccg
cgatcaggcagcggcagcctggacgacgacagcctgccagagtggtgtctggaggacgca
gacgaggaggcgggtaccttcgactcatcgggggcctttctctcactcaagaaagcttcc
aaggagccaattctggaggagggagagctggacttcaaacccttggaagagtgtgaagaa
ggcctggaagaggacgactgtcagctcaaagggaccaaagatattgaaacggatgcagaa
cgaaaagagtattcgagagcatcagaggaggcattacctgcagcccctcccgtctccgag
cctcagtctcggtccctgatccagccaaacagaacagaagagtctgagaggccgattgaa
cggcagccaccgctggagctgcccccagagaactgcaaagcccccctgcacgtccccatg
tccaacagcatgcgtgaacccatgaaccacatttctacaactcttgcagaagtatctgct
ccatcacccattgtccagctatcgcaaaagcacatggtggtccccgcggcgatgaaacat
cctttgtccttctcctcaagtttaatggcacctattggcaggcccacggctgtgtcacac
gacacagatgaagatgagagactcaaacactttgagcaggaggcagagaagatggtagca
taccttcaggatagtgtggtggatgatgacagacttacagtaaagacttcagagaagccc
aaacctgtaggccttccgctcaccaacgaggccgctctcaaatggttctacaaagacccc
caaggggagatacagggaccattcagcaacccagagatgacggagtggtttcaggccggt
tacttcaccatgtctctcttggtcaaaagagggtgtgacgaggtgtttcaagcactgggg
gacataataaagatatgggggagagtaccgttcacacctggcccagcaccgcctcctcta
caggctgaaggtgatcaggagaggttgaagcggcagcaggagctcactgctctcaacctc
taccagttacagcagctccaatatcaatacctcctcaggcagcagtatgcgcaggcgctg
gctcagcagaaaactctgaactcggctcctcttcaacagcagcagcaacaccaacagcag
atcaacctgcttctacagcaataccagaccctcaagctgagagcgtcagagagccccctc
cctcctgtgacccgctccccgtctgtacccgatactggttctgtgtgggaaatgcagaac
tcgtcctctcaggcttcctgtacacccaacgttcaacaagctgctccaaacacaggtgta
atgcatcatgttgtatcgcactcaacagcgtgggatggcagcagcgtatgggatttaccc
atcgactccgtggctcaggcgccaaccatcgagcagatgcaacagttggagaagtcaaag
tcggctaagttggagttggaaaggcgtgatgccgaaatgagagcaaaaagggaggaagag
gagaggaaacggctagaagaggccctgagggcgcgacaggaagaagaacgcaagtgcttg
gcagaagaggagctggcacggcacaaacaggaggaggcattaagacgggagcgagagcaa
gatgaggcacaacgcaggcaaaaagaggaagaggagagaatggcacaagaggaagctctc
cgtagattagaagagaggcggagggaagaggaggagagaaggaaacgagaagagttcctt
cgcaaacaggaggatgagcgcagaaagcaggaggaactagaagcactgaggaggcgtgag
gaggagaagcgagcagaggatgaggcagcagctgctgcggctgttttagcacaacaacaa
ctggaggagcagaagaggagagagcaggaggcccagagacagcaagagcagcagagacag
aggcagcagcagcaggaggcgctcaggaggctgcagcagcagcagcagcaacagcaactc
gcacagatgaagcttccgtcctcttcaaagtggggccaacagtcgtcggtcagcgctgtg
aaccagaaccagagcgccctgtcgctggcagagatccagaaactggaagaggagagagaa
cggcagacgagagaagagcagcgacgtcagcagcaggagatgctgaagctccagcagcag
caggccctgcatctggctcagcagccccaggccaagatgtctagctggggcagtgtggcc
acacagccggctgccaccaagtcgctgctggagattcagagggaggaagcccagcagatg
aaacagcggcaggagcagccgccaccgcagcagcagcagcagcaacaacaacagcagcca
cagcagcagccgcaaccgcagcccgtcgtcccacagcagagccgcagtcaaaacaaaact
acgtcgtctctcagtagctcagtttggggctccatgaacacgagcccctccactaactgg
ggctcggactccagcagcatctggggcgacacaaacaactctaacttgggcttctgggat
gaggctgtgaaagaggccgtgcagcaaccacctccaaccaagaaagccagcacgcagaag
aacaacaaaggcaacgccaacctcagtaactctgtgagtgggcgggtcaataagaaagcc
gaggaggaggaggagaagttggtgaagttgtttaaaggggtcaataagagccatcaggac
accttcatgcaatggtgtgagcaaaccctgcacaccctcaacacggccaacaatttggat
gttcccacgtttgcatccttcctgaaagaagtggactctccgtatgaggtgcacgactac
gtccgggcctatctgggggacactcccgaggccaaggactttgccaagcagttcatcgaa
cgacgtgccaaacagaacgctaaccaacagaaaccggcaccgcagaaccaacagcaagcc
ctcaagcagcagcagcagcagcagcagcagcagcagcagcagcagcaggattctgtatgg
ggtggatcatcgtcggtgtatcagtccaaccatacgagcgcccagcagcaacgctttgag
accgtcacctcagggaaaaagaaaaagaagcagaagatggtccgcgcagaccccagcctt
ctaggtttttctgtgaatgcctcatctgagagactgaatatgggagagattgagactttg
gaggacttttaa
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