Pseudochaenichthys georgianus (South Georgia icefish): 117462212
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Entry
117462212 CDS
T09629
Symbol
cldn18
Name
(RefSeq) claudin-18
KO
K06087
claudin
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03272
Virion - Hepatitis viruses
pgeo04382
Cornified envelope formation
pgeo04514
Cell adhesion molecule (CAM) interaction
pgeo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
117462212 (cldn18)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117462212 (cldn18)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117462212 (cldn18)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117462212 (cldn18)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pgeo03037
]
117462212 (cldn18)
04147 Exosome [BR:
pgeo04147
]
117462212 (cldn18)
Cilium and associated proteins [BR:
pgeo03037
]
Other cilia and associated proteins
Stereociliary proteins
117462212 (cldn18)
Exosome [BR:
pgeo04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
117462212 (cldn18)
Exosomal proteins of colorectal cancer cells
117462212 (cldn18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Amastin
Motif
Other DBs
NCBI-GeneID:
117462212
NCBI-ProteinID:
XP_033960224
LinkDB
All DBs
Position
17:complement(7397751..7402614)
Genome browser
AA seq
242 aa
AA seq
DB search
MAPSVLQNGGFILGLVGAAALIAATAMNNWSVKDRQGDVVTSVYTYKGLWKDCETTSSGL
TECRPLYGLLGFSGTFQAVRALMIVGVVLGVLGAVISLFSLTCLSMTSMADTTKAKMSLT
AGIMFIIGGVCGIAGASIYANQIVASFRLSTNPNYGGNMEGGMGGGMGGGMGGIPRYTFG
PALFIGWIGGGVLVIGGILKSVAFRGMVKDEKPQYPGVAYKPQPRTKSALPDHHSEGAKN
YV
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atggcgccttcagttctgcagaatgggggctttattctgggtttggttggagcagcagcc
ctcatcgcagcgaccgccatgaacaactggagcgtgaaggacaggcagggggacgtggtg
acgtccgtctacacctacaagggtctgtggaaggactgtgagacgacgtcctcggggtta
actgagtgccgtccgctctacggcctgctgggattctcaggaaccttccaggcggtgcgg
gccctgatgatagtgggggtggtgctgggggtcctgggggccgtgatatcactgttctct
ctcacctgcctctcgatgaccagcatggctgacaccaccaaggccaagatgagcctcacc
gccggcatcatgttcatcatcggcggtgtgtgtggcatcgcaggagcctccatctacgcc
aatcagatcgtggccagcttcaggctctccaccaaccccaactacggaggcaacatggaa
ggagggatggggggagggatggggggaggaatgggagggattcccagatacacatttggc
cccgcgctgtttataggctggatcggagggggcgtcctggttattgggggcatcctgaag
tccgtggccttcaggggaatggtgaaagatgaaaaaccacagtacccgggggtagcgtac
aaacctcagccccgcaccaaaagcgctctgcctgatcaccattcagagggagccaagaat
tatgtgtaa
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integrated database retrieval system
