Pseudochaenichthys georgianus (South Georgia icefish): 117462322
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Entry
117462322 CDS
T09629
Symbol
myom1a
Name
(RefSeq) myomesin 1a (skelemin) isoform X1
KO
K24495
myomesin
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117462322 (myom1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
117462322 (myom1a)
Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
117462322 (myom1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_DSCAM-DSCAML_C
Ig_2
ig
V-set
Pur_ac_phosph_N
C2-set_2
C2-set_3
Receptor_2B4
ChitinaseA_N
Motif
Other DBs
NCBI-GeneID:
117462322
NCBI-ProteinID:
XP_033960386
LinkDB
All DBs
Position
17:30497278..30519886
Genome browser
AA seq
1505 aa
AA seq
DB search
MSGSVTVTQKLQQHQQEHQQHHFESSFHLSTKSSVSQQSYSACKTSSRRLKTTVKTEKGQ
EVVKLSPLPKRAKRTYLAMDTDKEVIGYVIPVFRASHEAVRCLIESHEEDVTEEGINYVA
MRNLFVREAREAVEVKKVEKNTRTTHIREVAGRMELGKTLEEWAEFRKKMNPDSLTHLPE
FIIKPRGQTVWEGKTVKLHCTVAGWPKPRIAWYKNNVLIDAKAKPEKYTVENSYNMHSLE
IKNCDFLDTAQYYASALNVKGEASSVAYIVIKRFQEGAEAGPLDPKPHGFCAEHGVTFRT
TIIEKFEVAFGSEGDTLSLGCTVIVYPTVKKYQPEVVWYRDSVPLKPSKWVQTLWSGERA
TLTLVHLNKEDEGMYTMRVNTKSGFDTYSAYVFVRDAEVEVEGLPVAPLDVHCHDANKDY
VVVTWKQPAVEGSSSILGYFIDRCEVGTHHWAQCNDAPVKYARFPVTGLVEGRSYVFRVS
AQNKAGISHPSRVSEAVVAMDPSDRARLRAGPSAPWTGMIKFTEEDTTVGVVPGEPSDVV
VTEATKSYVVLAWKPPMQRGHEGVMYYIEKCISESDTWQRVNTGMPVKSPRFALFDLAEG
KSYSFRVRSCNSAGVSESSESTGDITVGDKLDLPSAPGSPVTTRNTNTSVVVFWSASKEV
KHLAGYYIEYSAVGTDEWTPCNNKPVKKTRFVCHGLTTGTNIVFRVKAVNAAGYSLSSAN
SEAVVVQAAVSISGNPTNVTLVEAVKDYMTLAWTEPSFNGGADIRGYFVDYRTVKGGVVG
KWHEMNHKALPAPSYKAENLKENVLYQFQVRAMNMAGVSKASLPSSAIECKEWTITLPGV
PVGLHALEVRDTSAVVLWEPPVFSGRTPVNGYYLDLKLASAGEADWKAAHEKVNTGKHMK
VTGMKAGASYVFRVRAQNLAGVGKSSAALGPILSQTRPGTNEIYVDVDDDGVISMVFECS
EMKEGSEFVWSKNYKTITDTSRLTMVTEGGKSRAIFNSPSLEDLGTFSCVVTNTEGFSSS
YTLTEEGLKRFLDISHDHKFPVIPFKSEMAMDLLEKGLVRFWTQVEKCSSACTVDYVFNN
AIITDNKKYTVNFNKSTGIIEMFMDSLEVTDEGTFTFNLVDGKAKGTTSLVLIGDEFREL
QKKSEFERAEWVRKQGPHFVEYLGFTVTPECNVLLKCKIGNIKPETEITWSKDKIEIAED
DEDAAKIERKDGHLTFNIGKCVIKQEKPKGKEGKKAATAEDVPPPPRAKISKADKGVYGV
VLRDERGKDKSSFDLTDAGYQTVMNELFRVIAHSSSDIKIVSTEHGIILSSSVTYYNEEL
RVGWLQKDAKIAVSERVKSGVTGEELWLKINEPTEKDKGKYTVDIFDGKDGVKRVFDLSG
KAWEEAFEEFQRLKAAALAERNRARVVGGLPDVVAIQEGKSLNLTGNVWGEPVPEVSWTK
NDKELLSNERYQLKFEHGKFASITITSVTTADSGKYALLVKNKYGKEAGEFTVSVYNPEE
EEKKG
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggatcagtaacggtgacgcagaagctgcagcagcatcagcaggaacatcagcag
catcactttgagagcagctttcacctgagcaccaagtcgtctgttagccagcaatcgtac
tccgcttgcaagaccagcagccgtcgcctgaagaccactgtgaagacagagaaggggcag
gaggtggttaaactgagcccactacccaagagagccaaacgcacctaccttgcaatggac
acggacaaggaagtcatcggctatgtcattcccgtatttcgagccagtcatgaagctgtt
cgctgtctgattgagtcccacgaggaggatgtcacggaggaggggattaactatgtggcc
atgaggaacctgtttgtcagggaggccagggaggctgtggaggtgaaaaaagtggagaag
aacaccagaaccacgcatatcagggaagtggccggacgcatggaactgggcaagactttg
gaggagtgggcagagttccgtaagaagatgaacccagacagcctgacacaccttccagag
tttatcatcaagccccgtggacaaactgtctgggaggggaagaccgtgaagctgcactgc
actgtggctggatggcccaaacctaggatcgcctggtacaaaaacaatgtgctcattgat
gccaaggccaagcccgagaagtacacagttgagaacagttacaacatgcactccctggag
atcaagaactgtgatttccttgacaccgctcagtattacgcctctgccctcaatgtgaaa
ggagaagcttcctctgtggcttatattgttatcaaaaggttccaggagggcgcagaagca
ggcccactcgatcctaaaccacatggtttctgcgctgagcacggtgtcacctttagaacc
accatcattgagaaatttgaagtggctttcggcagtgaaggcgacacactgagtcttggc
tgcactgtcattgtttatcccactgtgaaaaaataccagcctgaggtcgtgtggtacaga
gactctgtcccattgaagccctctaaatgggtccaaaccctctggtctggggagcgtgcc
acactcacattggtccacctcaacaaggaagacgagggcatgtacaccatgcgtgtcaac
accaaatctggctttgacacctactctgcgtatgtgtttgtgagagatgctgaagtggag
gtggaggggcttcccgtggctcccctggatgtgcactgtcatgatgccaacaaggactac
gtggtggtgacctggaagcagccggcggtggagggcagcagctccatcctgggatacttc
atcgacaggtgtgaggtgggcactcaccactgggctcagtgtaacgacgccccggtgaag
tacgcccgcttccccgtcaccggtctggtggaaggccgctcctacgtgttcagagtgagc
gcccagaacaaggcaggaatcagccatccatcccgtgtctccgaggctgtggttgccatg
gatccctccgacagagcccggctcagagctggcccctcagctccttggactgggatgatc
aagttcacagaggaggataccaccgtgggcgttgtccccggagaaccctctgatgttgtg
gttactgaggcgaccaagagctacgtggtgctcgcctggaagcctccgatgcagcgcggt
catgaaggagtcatgtattacatcgagaagtgtatttctgagtcagacacctggcagagg
gtgaacaccggcatgccagtgaagtctcctcgcttcgccctgttcgacctggcagaggga
aaatcttacagcttccgcgttcgctcctgtaactccgctggtgtgagcgagtcctctgaa
tccacaggagacatcacggtcggagataaactggacctgccctcagctcctggcagtcca
gtgaccaccaggaacaccaacacctccgtggtcgtcttctggagcgcctctaaggaagtc
aaacacctggccggctactacatcgaatacagtgcggtgggcacagatgaatggacacct
tgcaacaacaaacctgtcaagaagaccaggtttgtgtgccacggcctgactaccgggaca
aacatcgtgttcagagtgaaggcagtgaacgctgcaggatacagcctgagctccgccaac
tctgaagctgtggttgtgcaagctgccgtctccatctccggaaaccccaccaatgttacc
ctggtggaggctgtgaaggattacatgacactggcctggactgagccctctttcaatgga
ggagctgatatccggggatattttgtggactacaggaccgtgaagggaggcgttgttgga
aaatggcatgagatgaaccacaaggcactgcctgctccctcctataaagctgagaacctg
aaggagaacgtattgtaccagttccaggtgcgcgctatgaacatggcaggtgtgagtaaa
gcctctctgcccagctcagcgatagagtgcaaggaatggaccattactttgccaggtgtt
cctgtgggtcttcatgcgctggaggtccgtgacacctcggccgtggtgctgtgggagccg
cctgtattcagtggccgcactcctgtcaatggatactatctggacctgaagctggcctct
gctggagaggcagactggaaggctgctcacgagaaggtcaacacgggcaaacacatgaag
gtgacggggatgaaggcgggtgcttcctacgtcttccgtgtgcgcgctcaaaatctggct
ggcgtcggaaagtcctcagcagccttaggtccaatcctgtcccagactcgccccggcacc
aatgagatttatgtggatgtggatgatgatggtgtgatctcgatggtctttgagtgctct
gagatgaaggagggctctgagtttgtttggtccaagaactacaagaccattacagacacc
tctcgccttaccatggttactgaagggggcaagtccagagccatcttcaacagtccctcc
ctggaggatctgggcaccttctcctgtgttgtcaccaacactgagggcttctcctccagc
tacactctcactgaggagggtctcaaacgttttctggacatcagccatgaccacaagttc
ccagttatccccttcaagagtgaaatggccatggatctgctggagaagggtctcgtgcgt
ttctggactcaggtggagaaatgcagctccgcctgcactgtggactatgtcttcaataat
gccatcattactgacaacaagaaatacacagtgaacttcaacaagtccaccggaatcatt
gaaatgttcatggactctctggaggtcactgacgagggaacgttcaccttcaacctggtg
gacggcaaagctaaggggacgaccagtctggtgctcattggagatgaattcagggagctt
cagaagaaatccgagtttgagagggccgaatgggtcaggaaacagggtcctcactttgtc
gagtaccttggcttcactgttactccagaatgcaatgtgctgttgaaatgcaagattgga
aatatcaaaccagagactgagatcacctggtccaaggacaaaattgaaattgcagaggat
gatgaggacgccgcgaaaatcgagagaaaggacggccatctgacctttaatatcggaaag
tgcgttattaagcaggagaaaccgaaaggaaaagaaggaaaaaaggctgcaactgcagag
gacgtgccaccgccaccaagagccaaaatctccaaggctgacaaaggtgtttacggtgtg
gtcctgagggacgagagaggcaaagataagagctccttcgatctgacagatgcaggatac
cagactgtaatgaacgagctgttcagggttattgcccactcctcctctgatatcaaaatc
gtcagtactgaacacggcatcatcctctcctcctcggtcacgtattacaatgaggagctg
cgtgttggatggcttcaaaaagatgctaagatcgccgtctcagagagagttaagtctgga
gtcacaggagaggagctttggcttaaaatcaatgagcccactgagaaggacaagggcaaa
tacaccgtggacatctttgatggcaaggatggcgtaaagagagtctttgatctgagcggc
aaggcatgggaagaggcatttgaagaattccagaggctcaaggcggcagctctcgcagaa
agaaaccgcgctcgtgtggttggaggcttgccagatgtggttgcaatccaggagggcaag
tccctgaacctgactggaaatgtctggggcgagcccgtacctgaggtgagctggacgaag
aacgacaaggagctgctgtctaatgagcgctaccagctcaagttcgagcacggcaagttt
gccagcatcacaatcacctccgtcaccacggctgactctggcaaatatgccctcctggtg
aagaacaagtacggaaaagaggctggagagttcaccgtcagcgtgtacaacccagaggag
gaggagaagaaaggctaa
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