Pseudochaenichthys georgianus (South Georgia icefish): 117462325
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Entry
117462325 CDS
T09629
Symbol
calr3b
Name
(RefSeq) calreticulin 3b
KO
K08057
calreticulin
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04141
Protein processing in endoplasmic reticulum
pgeo04145
Phagosome
pgeo04148
Efferocytosis
pgeo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117462325 (calr3b)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117462325 (calr3b)
04148 Efferocytosis
117462325 (calr3b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117462325 (calr3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pgeo03110
]
117462325 (calr3b)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pgeo04091
]
117462325 (calr3b)
Chaperones and folding catalysts [BR:
pgeo03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
117462325 (calr3b)
Lectins [BR:
pgeo04091
]
L-type lectins
117462325 (calr3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
DUF87
Motif
Other DBs
NCBI-GeneID:
117462325
NCBI-ProteinID:
XP_033960394
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Position
17:complement(31753019..31757050)
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AA seq
420 aa
AA seq
DB search
MQVLGVVAVILAVYCVHAKIYFREEFLDGDEWRSRWVNSKHKTDYGEWKLTAGNFYGDAE
KDKGLQTSQDARFYATSARFEPFSNEDKPLVIQFTVKHEQKIDCGGGYVKVFPSDLEQTE
MHGDSSYYIMFGPDICGYSTKKVHVIFNYKGKNHLIKKEIKCKDDELTHMYTLILNPDQT
YEVKIDNEKVESGSLEEDWDLLPAKKIKDPEAKKPEDWDDRAKVDDAEDAKPEEWDRPEN
IPDPDAKKPEDWDVDMDGEWEPAMIPNQEYKGEWKPKQIDNPDYKGAWVHPEIDNPEYSA
DSNIYKFDKISVLGLDLWQVKSGTIFDNFLITDDVKEAEDITNETWGATKEPERKMKQEQ
DDLKRKEEEEKTKEQETEGDEEDAEDEEDEDLDEEEDTKDEMEEALSEMDEEEAKLKDEL
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtcttgggtgtagttgcggtaatattagcagtgtactgtgtacatgcaaagatc
tactttcgggaggagtttctcgacggtgatgaatggagaagtcgctgggtaaactccaaa
cacaaaactgactatggagagtggaaactaacagctggcaacttctatggagatgctgag
aaagacaaaggtttgcaaacaagccaggatgctcgcttctatgccacctctgcccgtttt
gagcctttcagcaatgaggacaagcctttagtcattcagtttactgtgaagcatgagcag
aagattgactgtggtggtggttatgtgaaggtcttcccttctgacttggagcagactgaa
atgcatggagattcctcatactacatcatgtttggccctgatatctgtgggtacagcacc
aagaaagtacacgtcatcttcaattacaagggcaagaatcacctcatcaagaaagagatt
aagtgcaaggatgatgagctgacccacatgtacacgttgatcctgaatccagatcagacc
tatgaggtaaagattgataatgagaaggtagaatctggcagcttggaagaggactgggac
ttattgcctgctaagaaaatcaaggatcctgaagctaagaagccagaggactgggatgat
cgtgccaaggttgacgatgctgaagacgccaagcctgaggagtgggacagacctgagaac
attccagaccctgacgctaaaaagcctgaagactgggacgtagatatggatggagagtgg
gagccagccatgatccctaaccaagagtacaagggagaatggaaacccaaacagatcgac
aaccccgactacaaaggagcctgggtgcatcctgagattgacaatcctgaatacagtgct
gattcaaacatctacaagtttgataagatttctgtgttaggtcttgatctttggcaggtg
aaatctggtaccatctttgacaacttcttgatcaccgacgatgtgaaggaagcagaagac
attaccaacgagacatggggtgcgacaaaggaaccagagaggaaaatgaaacaggagcaa
gatgacctgaaacgaaaggaagaggaggagaagaccaaagaacaagaaaccgaaggtgat
gaagaggatgctgaagacgaggaagatgaagacctcgatgaggaagaagacacaaaggat
gaaatggaggaggcactttcagaaatggatgaagaagaagcaaagcttaaagatgagctt
tga
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