Pseudochaenichthys georgianus (South Georgia icefish): 117462354
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Entry
117462354 CDS
T09629
Symbol
mib1
Name
(RefSeq) E3 ubiquitin-protein ligase mib1 isoform X4
KO
K10645
E3 ubiquitin-protein ligase mind-bomb [EC:
2.3.2.27
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117462354 (mib1)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117462354 (mib1)
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117462354 (mib1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank_5
Ank
MIB_HERC2
Ank_4
SH3_15
Ank_3
zf-C3HC4_3
ZZ
Ank_KRIT1
zf-C3HC4_2
Sina_RING
Prok-RING_4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
117462354
NCBI-ProteinID:
XP_033960441
LinkDB
All DBs
Position
17:29000029..29052947
Genome browser
AA seq
1050 aa
AA seq
DB search
MTTGRNNRAMMEGVGARVVRGPDWKWGKQDGGEGHVGTVRSFESPEEVVVVWDNGTAANY
RCSGAYDVRILDSAPTGIKHDGTMCDTCRQQPIIGIRWKCAECTNYDLCTTCYHGDKHHL
RHRFYRITTPGSERVLLESRRKSKKITARGIFTGGRVVRGVDWQWEDQDGGNGRRGKVTE
IQDWSAASPHSAAYVLWDNGAKNLYRVGFEGMSDLKCVQDAKGGSFYRDHCPVLGEQNGN
RNPGGLQIEDLVNIDLDLEIVQSLQHGHGGWTDGMFETLTTPGKVCGIDEDHDIVVQYLS
GNRWTFNPAVLTKANAVRSGDVAAGAEGGTSQFLVGDLVQICLDIDRIKLLQRGHGEWAE
AMLPTLGKVGRVQQIYSDSDLKVEVCGTSWTYNPAAVTKIAPSGSAVSNASGERLSQLLK
KLFETQESGDINEELVKAAANGDLAKVEDILKRPEVDVNGQCAGHTAMQAASQNGHVDVL
KLLLKHNVDLEAEDKDGDRAVHHAAFGDEGSVIEVLQRGGADLNARNKRRQTPLHIAVNK
GHLQVVKTLLDFGCHPSLQDSEGDTPLHDAISKKRDDMLSVLLEAGADVTITNNNGFNAL
HHAALRGNPSAMRVLLSKLPRPWIVDEKKDDGYTALHLAALNNHVEVAELLVHQGSASLD
VQNVNQQTALHLAVERQHTQIVRLLVRAEAKLDVQDKDGDTPLHEALRHHTLSQLRQLQD
MQDVSKVEPWEPSKNTLIMGLGTQGAEKKSAASIACFLAANGADLTIRNKKGQSPLDLCP
DPSLCKALAKCHKEKSSGQVGTRSPSQNSNNETLDECMVCSDLKRDTIFGPCGHIATCSL
CSPRVKKCLICKDQVQSRTKVSERLVPVQGNDSPTRADNFYRFFGEFVPPQIEECVVCSD
KKAAVLFQPCGHMCACENCASLMKKCVQCRAVVELRTPFVMCCGGKAGSTNNMAGGSQDI
VQPNNLALSWSSGNIPALQRDKDNTNINADVQKLQQQLQDIKEQTMCPVCLDRLKNMIFM
CGHGTCQLCGDRMSECPICRKAIERRILLY
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgggaggaataaccgagcgatgatggagggagttggggcgagagtggtccgg
ggacccgactggaagtgggggaagcaggatggtggagagggacatgttggcaccgtcagg
agttttgaaagtccagaggaggtggtcgttgtctgggataacgggacggctgctaactac
cgctgctccggggcttacgacgtgaggatattagacagtgctccaacaggcatcaagcat
gatggaaccatgtgtgacacctgccgtcaacagcccatcattggtattcgctggaaatgt
gctgagtgcaccaattacgacctttgcacaacctgttaccatggagacaagcatcacctg
agacaccggttctacaggatcactaccccaggcagtgagagagtgcttttggagtcgcgt
cgaaagtcaaagaaaatcaccgcaagagggatcttcactggtggccgagtggtgagggga
gtggactggcagtgggaagaccaggatggaggcaacggaaggagaggaaaggtgacagag
atacaggactggagtgccgccagcccgcacagcgcggcctacgttctgtgggacaatggg
gccaagaacctgtacagagttggctttgagggaatgtcggatctgaaatgcgtccaggat
gccaaaggcggctctttctacagagaccactgccccgttttaggtgagcagaatggcaac
agaaatcctggcggtctccagattgaagatttggtcaacatcgacttagacctggagatt
gttcagtcgctgcaacacggtcacggaggatggactgacggcatgtttgagacgctcacc
acccccggcaaggtctgcggcatcgatgaagaccacgatatcgtcgttcagtacctcagt
gggaacaggtggactttcaacccagcagtgctgacgaaggccaatgcggtgcgcagcggt
gacgtagcagcaggggcggaggggggcacctcccagttcctggtgggagacctggtgcag
atctgcttagacatcgaccgcatcaagctgctgcagagaggccacggagagtgggctgag
gccatgcttcctaccctcggcaaggtgggccgtgtgcagcagatctactccgacagtgac
ctgaaggtcgaggtttgtggaacttcttggacgtacaatcccgccgccgtcaccaagatc
gccccctccggctcggctgtcagcaatgcctctggagagcgtctgtctcagttactgaag
aaactatttgagacacaagagtccggagacatcaacgaggagctggtcaaggcagcagcc
aatggcgacttggccaaggtggaggacatccttaagagacccgaagtggacgtgaatggg
cagtgtgcgggacacactgctatgcaggcagccagtcagaacgggcacgtggatgtgctg
aagctgctgctcaaacacaacgttgacctggaagctgaggacaaagatggagaccgggca
gtgcaccacgcagccttcggtgatgagggctctgtcatcgaggtgctgcagaggggcggt
gccgacttgaatgccaggaacaagcgaaggcagacaccattacacatagctgtgaacaag
ggacacctgcaggtggtcaagaccctgctggactttggctgccacccgagccttcaggat
tcggagggggacacacccctgcacgatgccataagcaagaagagagacgacatgctgtca
gtgctgctggaggctggggccgatgtcaccatcaccaacaataacggcttcaatgctttg
catcacgcggcactgcgagggaaccccagtgccatgcgcgtgctgctatctaaactgcca
cggccttggatcgtagacgagaagaaggacgacggttacactgcactgcacctggctgcc
ctcaacaaccacgtggaggtggctgagctgttggtgcaccagggaagtgccagcttagac
gtccagaacgtcaaccagcagacggcgttacacctggcagtggagcgtcaacacacgcag
atagtccggctgctggtgcgtgcagaggccaagcttgatgtgcaggacaaggacggggac
acaccacttcacgaggcactgcgtcaccacacgctgtcccaactgcggcaactccaagat
atgcaggatgtcagcaaagtggagccctgggagccttccaagaacacattaatcatgggc
ctcggcacccagggggcggagaagaagagcgcagcatccatcgcctgcttcttggcagcc
aacggagcggacctgaccattcgaaacaagaagggccagtcccctctggacctgtgtcca
gaccccagcctctgcaaagctctggccaaatgtcacaaagagaagagcagtggccaggtg
ggcacccgcagcccgtctcagaacagcaacaacgagacgctggacgagtgtatggtgtgt
tcagaccttaagagagacactatcttcgggccctgtggacacatcgccacctgctccctt
tgctcacctcgggttaaaaagtgtcttatctgcaaggatcaggtccagtcaagaactaag
gtatcagaaagactagtaccagtccagggaaatgattcaccaactagagcagacaacttt
taccgcttttttggtgaatttgtccctccacagattgaggagtgcgtagtctgctctgac
aaaaaagcagccgttttgttccagccctgcggtcacatgtgcgcttgtgagaactgtgcc
agcctcatgaagaagtgcgtacagtgccgggctgttgtagaactccgcacccctttcgtt
atgtgctgtggtgggaaagcagggagcactaacaatatggcagggggatcgcaggatatt
gtccagcccaacaatctggctctaagttggtccagcggaaacatccccgccttgcagaga
gacaaggacaacaccaacatcaacgcagacgttcagaagctacagcagcagctgcaagac
atcaaggagcagacgatgtgtccggtgtgtctggaccggctgaagaacatgatcttcatg
tgcggccacggcacctgccagctgtgtggggaccggatgagcgagtgccccatctgccgc
aaggccatcgagcgacgcatccttctttactag
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